Gene PMT9312_0636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0636 
Symbol 
ID3765436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp599778 
End bp600344 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content28% 
IMG OID637797157 
Productisochorismatase hydrolase family protein 
Protein accessionYP_397133 
Protein GI78779021 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.521489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATC AAGAAATCTC TTATGATAAA TTATCATCGA AAGTAAACGC GTTGCTAATT 
ATTGATATTC AGGGAAAAAT AATAAGACCA ATTTTTAATA AGAATTCAAT AATCAAAAAC
ATCAAAAAGC TTATAAATGC TTACCAAATT TTAGAAGAAA ACATATTTGT ATCTGAACAG
AACCCACTCA AATTGGGTGT GACGATCCCT GAATTATTAC CCAAAGTACG ATTTAAAAAA
ATTGATAAAA TGGATTTTAG CCTAGCAAAC ATACAAGAAT TTTTACAAGA AATTGAAAAT
AAGAAAATTA CAAATTTGAT AGTTTGTGGT ATCGAAACAC ATATTTGCAT TCAGCAAACA
GTCTTAGATT TTTTACAAAA AGGATTTGAA GTAGTTCTTA TTTCTGATGC TATGGGCAGT
CGAAATTGTA TAGATCATGA AATAGCCTTA CAAAGAATGA CTCAAAAGGG GGCAGTCTTA
ACAACTACTG AATCAATAAT CTTTGAATTA TGCAAGACTG CTAATAGAAA AGAATTCAAA
GAAATTAGAG ATATAATATT GAGTTAA
 
Protein sequence
MNDQEISYDK LSSKVNALLI IDIQGKIIRP IFNKNSIIKN IKKLINAYQI LEENIFVSEQ 
NPLKLGVTIP ELLPKVRFKK IDKMDFSLAN IQEFLQEIEN KKITNLIVCG IETHICIQQT
VLDFLQKGFE VVLISDAMGS RNCIDHEIAL QRMTQKGAVL TTTESIIFEL CKTANRKEFK
EIRDIILS