Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0636 |
Symbol | |
ID | 3765436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 599778 |
End bp | 600344 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637797157 |
Product | isochorismatase hydrolase family protein |
Protein accession | YP_397133 |
Protein GI | 78779021 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.521489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGATC AAGAAATCTC TTATGATAAA TTATCATCGA AAGTAAACGC GTTGCTAATT ATTGATATTC AGGGAAAAAT AATAAGACCA ATTTTTAATA AGAATTCAAT AATCAAAAAC ATCAAAAAGC TTATAAATGC TTACCAAATT TTAGAAGAAA ACATATTTGT ATCTGAACAG AACCCACTCA AATTGGGTGT GACGATCCCT GAATTATTAC CCAAAGTACG ATTTAAAAAA ATTGATAAAA TGGATTTTAG CCTAGCAAAC ATACAAGAAT TTTTACAAGA AATTGAAAAT AAGAAAATTA CAAATTTGAT AGTTTGTGGT ATCGAAACAC ATATTTGCAT TCAGCAAACA GTCTTAGATT TTTTACAAAA AGGATTTGAA GTAGTTCTTA TTTCTGATGC TATGGGCAGT CGAAATTGTA TAGATCATGA AATAGCCTTA CAAAGAATGA CTCAAAAGGG GGCAGTCTTA ACAACTACTG AATCAATAAT CTTTGAATTA TGCAAGACTG CTAATAGAAA AGAATTCAAA GAAATTAGAG ATATAATATT GAGTTAA
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Protein sequence | MNDQEISYDK LSSKVNALLI IDIQGKIIRP IFNKNSIIKN IKKLINAYQI LEENIFVSEQ NPLKLGVTIP ELLPKVRFKK IDKMDFSLAN IQEFLQEIEN KKITNLIVCG IETHICIQQT VLDFLQKGFE VVLISDAMGS RNCIDHEIAL QRMTQKGAVL TTTESIIFEL CKTANRKEFK EIRDIILS
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