Gene PMT9312_0634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0634 
Symbol 
ID3765434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp597696 
End bp598697 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content25% 
IMG OID637797155 
Productputative light-dependent protochlorophyllide oxido-reductase 
Protein accessionYP_397131 
Protein GI78779019 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.257073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAA ATAAAAATAT TTTAATTACT GGAGGCAATT CAGGAATAGG TTTCTTTGCC 
ATTGTAAATT TACTAAAGAC TAAAAATAAT TTATACATTT TAATAAAATC TGAATTTAGA
AAGAATGATT TTTTAATAAG AATTGAGAAA TATTTTGAAA AAAATTACCT TAGTAAATAT
TTAAATATTA TTGAAAATTG TGACCTTTCT GATTTAGAAA ATATTAAAAA AATTAAAGAT
TATCTAATTA GTAAAAATAT CTTTTTAGAT GTAGTTATCT TAAATGCAGG TTTGCAATAT
ACTGGTTCGT TTTATCCTAA AGTATCAAAA CAAGGCATAG AACTTACTTT TGCAGTTAAT
CATCTTGCAC ATTTTTATTT GATAAATATC ATAAAAGATT TTGTTAGCAA TAAAGAAGAA
TCCAGAATAA TTATTACATC ATCAGATGTT CACGACCCCA AAAGCTCAGG TGGAAATATA
GGAAAGAAAG CAGGACTTAA TAATTTAGTT GATTTTAGAA AAAAAGTTGC TGGACGATTT
TTAAATTTTA ATGCTGATGA ATCTTATAAA AATAGTAAGT TATGTAATAT TTTGTTTGCA
AAAGAACTTG CAAAAAAATT TAAAATATCT TCGAGTAAGA TTTCTGTAAT TACTTGGGCC
CCTGGACTTG TAATTCCAGA TGATGATTCA GGTTTCTTTA GATATAGCAA ATGTTTTAAT
CTCTTTGGAT ATTTTATCTT TTCTAAAGTT GCAAAAAATA TTTTAGGAAT TTCTGAAAGT
GTAGAAAATG CTGGAAAGAT TCTTTCTGAG ATTGTTTTTG ACTCAAGTTT TAATAATATT
GCATACATAC ATTTAAGTAA TAAACTTATA TCTTTTAAAA AACATAAATT AGTTGCAGGT
AAGGTTAGTG ATGAAGCAAA TAGTTCTGAG TTGGCTTCAA AACTCTGGAT TTTCAGTGAA
GAGATTTGCA GATCATTTGG CTTTGTTGCT TTCAATATTT AA
 
Protein sequence
MIENKNILIT GGNSGIGFFA IVNLLKTKNN LYILIKSEFR KNDFLIRIEK YFEKNYLSKY 
LNIIENCDLS DLENIKKIKD YLISKNIFLD VVILNAGLQY TGSFYPKVSK QGIELTFAVN
HLAHFYLINI IKDFVSNKEE SRIIITSSDV HDPKSSGGNI GKKAGLNNLV DFRKKVAGRF
LNFNADESYK NSKLCNILFA KELAKKFKIS SSKISVITWA PGLVIPDDDS GFFRYSKCFN
LFGYFIFSKV AKNILGISES VENAGKILSE IVFDSSFNNI AYIHLSNKLI SFKKHKLVAG
KVSDEANSSE LASKLWIFSE EICRSFGFVA FNI