Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0632 |
Symbol | |
ID | 3765432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 595473 |
End bp | 596180 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637797153 |
Product | short-chain dehydrogenase/reductase |
Protein accession | YP_397129 |
Protein GI | 78779017 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACCA TACTAATAAG TGGAGCTAAT AGAGGTATTG GACTAAATAT TGCACATAAA GAATTAAAAA CAGGCAACAG AATTAGTGTT GGTATTAGAA ATTTAGAATC ATTAAAAGGA AGTGTCATTG ATCCAAATAA ATGGCCAAAA GGGAAAATTT TAATTAACGA ATATGATGCA TTAAAAAAAA ATTCAGCCTC AAATTGGATA AATAATACCT TAGATGAATT TGGGGGGTTC GATTCAGTAA TAAATTGCTC TGGAGTATTA TCAAAAGTTC CTTTCTTATT TAAAGATGGC GATGAAGAAG AAATTTTAAA TACACTAAAT ATTAACTTTT TAGCAATTTG GAATTTATGT AGGCTTTCTT GGGAACATTT ATGCGCTTCA GATAGAGGTA GAATAATTGT TTTAGTTTCA ATGAGTGGGA AAAGATCCAA AGGGGATTTG GCCGCTTATT CTTCTTCGAA ATTTGCTTTG ATGGGATTAT GCCAGACAAT GAAAAATAAA GGTTGGGATA AAAATATTAG AATTTCAGCG ATTTGTCCAA GTTGGGTTAA TACAGAAATG GCTCAAAACA TCTCTTCACT AGACAAATCA AGCATGACCC AACCTCAGGA TATTGCTGAG ATATGCTCAA CTATTCTGAA GCTGCCGACA CAATCAGTTC CATTTGAAAT TGCCTTAAAT TGTAATTATG AAATTTAG
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Protein sequence | MRTILISGAN RGIGLNIAHK ELKTGNRISV GIRNLESLKG SVIDPNKWPK GKILINEYDA LKKNSASNWI NNTLDEFGGF DSVINCSGVL SKVPFLFKDG DEEEILNTLN INFLAIWNLC RLSWEHLCAS DRGRIIVLVS MSGKRSKGDL AAYSSSKFAL MGLCQTMKNK GWDKNIRISA ICPSWVNTEM AQNISSLDKS SMTQPQDIAE ICSTILKLPT QSVPFEIALN CNYEI
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