Gene PMT9312_0632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0632 
Symbol 
ID3765432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp595473 
End bp596180 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content32% 
IMG OID637797153 
Productshort-chain dehydrogenase/reductase 
Protein accessionYP_397129 
Protein GI78779017 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACCA TACTAATAAG TGGAGCTAAT AGAGGTATTG GACTAAATAT TGCACATAAA 
GAATTAAAAA CAGGCAACAG AATTAGTGTT GGTATTAGAA ATTTAGAATC ATTAAAAGGA
AGTGTCATTG ATCCAAATAA ATGGCCAAAA GGGAAAATTT TAATTAACGA ATATGATGCA
TTAAAAAAAA ATTCAGCCTC AAATTGGATA AATAATACCT TAGATGAATT TGGGGGGTTC
GATTCAGTAA TAAATTGCTC TGGAGTATTA TCAAAAGTTC CTTTCTTATT TAAAGATGGC
GATGAAGAAG AAATTTTAAA TACACTAAAT ATTAACTTTT TAGCAATTTG GAATTTATGT
AGGCTTTCTT GGGAACATTT ATGCGCTTCA GATAGAGGTA GAATAATTGT TTTAGTTTCA
ATGAGTGGGA AAAGATCCAA AGGGGATTTG GCCGCTTATT CTTCTTCGAA ATTTGCTTTG
ATGGGATTAT GCCAGACAAT GAAAAATAAA GGTTGGGATA AAAATATTAG AATTTCAGCG
ATTTGTCCAA GTTGGGTTAA TACAGAAATG GCTCAAAACA TCTCTTCACT AGACAAATCA
AGCATGACCC AACCTCAGGA TATTGCTGAG ATATGCTCAA CTATTCTGAA GCTGCCGACA
CAATCAGTTC CATTTGAAAT TGCCTTAAAT TGTAATTATG AAATTTAG
 
Protein sequence
MRTILISGAN RGIGLNIAHK ELKTGNRISV GIRNLESLKG SVIDPNKWPK GKILINEYDA 
LKKNSASNWI NNTLDEFGGF DSVINCSGVL SKVPFLFKDG DEEEILNTLN INFLAIWNLC
RLSWEHLCAS DRGRIIVLVS MSGKRSKGDL AAYSSSKFAL MGLCQTMKNK GWDKNIRISA
ICPSWVNTEM AQNISSLDKS SMTQPQDIAE ICSTILKLPT QSVPFEIALN CNYEI