Gene PMT9312_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0621 
Symbol 
ID3765421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp587244 
End bp588023 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content31% 
IMG OID637797142 
Productputative DNA polymerase III, epsilon subunit 
Protein accessionYP_397118 
Protein GI78779006 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTAT TTAATAAAAA AGGATTAAAT CAATTGGATT TTCTTCAGGA TCAAATTACA 
AGTAAAGCCT CTGAAATAGT TGTTACTAAT CAAAATAAAA AAATAGAAAA AATTTTAATT
CTTGATACTG AAACAACAGG TTTAGATGAA AATAAAGATG AAGTGATAGA GATAGGTTGT
ATTTTGTTTG ACGTATCTTT TAAATGTGTA CTTTCACAGG TCTCATTTTT ATTGCCGGTT
AACAACAATG AAGCCGAACA TGTTAATTGT ATATCTGCAG AAGTAACTAA TATCTCTCAA
CCTTGGGAAG ATGGATTAAA TTTCTTTTTA AAACTTGTTG ATTGTTCTGA TTTCATTGTT
GCGCATAATG TAGAGTTTGA TAAGAAATGG TTTGGGAAAG GAAGATTGCC TATGCTTAAT
AAAAAATGGA TATGCAGTTT AGATGATATT AATTGGTCTT TTCAAAAATC ACTAAAAACA
AGACCTTCAG TAACTGATCT AGCCCTATCT TTTTCAATAC CAGTTTGGAA TTTACATAGA
GCTTTGTCTG ATTGCTTTTA CATTTCTGAG GTCTTCAAAA AATGCGATAA TTTAGAGGAA
CTTTTACTTA AAGCTACTGA ACCGAGGTTT TTATACAAGG CCTTGGTTAG TTATGAAGAT
AGGTCTTTAG CTAAAAATGC TGGGTTCAGA TGGAATAGTC CTGTGCAAGG AGCATGGTCA
AGAAAATTAA CTACTGATGA GGCAAAAAAT CTTGATTTTA GAGTAGAGAT TCTGAATTAA
 
Protein sequence
MELFNKKGLN QLDFLQDQIT SKASEIVVTN QNKKIEKILI LDTETTGLDE NKDEVIEIGC 
ILFDVSFKCV LSQVSFLLPV NNNEAEHVNC ISAEVTNISQ PWEDGLNFFL KLVDCSDFIV
AHNVEFDKKW FGKGRLPMLN KKWICSLDDI NWSFQKSLKT RPSVTDLALS FSIPVWNLHR
ALSDCFYISE VFKKCDNLEE LLLKATEPRF LYKALVSYED RSLAKNAGFR WNSPVQGAWS
RKLTTDEAKN LDFRVEILN