Gene PMT9312_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0601 
Symbol 
ID3765401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp565835 
End bp566743 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content31% 
IMG OID637797122 
ProductABC transporter substrate-binding protein 
Protein accessionYP_397098 
Protein GI78778986 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.498334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAA AGTTTTTACT TTTAATTTTT GTATATTTGA TATGTCTTTT TTCAACTACC 
TCATGTAACA GAATCACAAC TAAAAATGAA ACTAAAAAAG AGGTGGTTTT AGCAAGCTTT
ACCGTTTTGG CAGATATAAT CCAAAATATT GTTAAAAATG ATGACTTCGT GGTTAGATCA
ATCACTAAAC CTGGGATAGA AGTTCATGGT TATAAACCAA CTCCAAGTGA CCTAATAAAT
GCCTCAGAAG CATTTGTGTT TGTGGATAAT GGATTTGGAT TTGAAATATG GTCAGAAAAA
TTTGTTTCTA ATTTGAAAGT TCAAAGAATA ACAATTGGAG ATGATTTGGA ACCCATATTT
ATAAGTGAAG ATTCTTACAA AGGTAAACCA AATCCCCATG CTTGGATTTC CCCAAAAAGA
GGAATTCTTT ATGTAGATAT TATCGTGGAA TCCTTATCAG AATTGAGGCC CACAAGAAGA
GAATTATTCG AAAAGAATGG AGAAACTTAT AAAAATAAAC TCTCTAAAAT TCATAAAGAT
TTTTCACTTT TTATTAATAA CTTAGAAAAA GATAAAAGGT ATCTAGTAAG TTGTGAGGGT
GCATTTTCTT ATCTTGCTAA TGATTATGGG TTAAATGAAG TTTACTTATG GCCCGTTAAT
GCCGAGAGTC AAATCACTCC AAAAAGGATG GCAAGAACAA TATCCTTAGT TAAGAAAAAA
AATGTCCCAG CTGTATTTTG TGAAAGTACT GTAAGCAATG AATCCCAAAT GGTTGTTGTA
AATGAAACTG GAACTAAATT TGGAGGAAAT CTTTATGTTG ATTCGTTGTC AGGTGATAAT
GGCCCAGCTA ATTCTTACTT AGGAATGCTG AAACATAATT TGGAAATTAT TAAAAGAGGT
CTTGAATAA
 
Protein sequence
MHKKFLLLIF VYLICLFSTT SCNRITTKNE TKKEVVLASF TVLADIIQNI VKNDDFVVRS 
ITKPGIEVHG YKPTPSDLIN ASEAFVFVDN GFGFEIWSEK FVSNLKVQRI TIGDDLEPIF
ISEDSYKGKP NPHAWISPKR GILYVDIIVE SLSELRPTRR ELFEKNGETY KNKLSKIHKD
FSLFINNLEK DKRYLVSCEG AFSYLANDYG LNEVYLWPVN AESQITPKRM ARTISLVKKK
NVPAVFCEST VSNESQMVVV NETGTKFGGN LYVDSLSGDN GPANSYLGML KHNLEIIKRG
LE