Gene PMT9312_0597 details

Gene Information

• Locus tag: PMT9312_0597
• Symbol: thrS
• ID: 3765397
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: -
• Start bp: 560970
• End bp: 562886
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637797118
• Product: threonyl-tRNA synthetase
• Protein accession: YP_397094
• Protein GI: 78778982
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.56327
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAATAA TTACCTTGCC TGATGGTTCA AAAAAGGTTT TCGAAAAATC TGTAACTATT 
CTAGAAATTG CCCAGAGTAT AGGTGCTGGA TTAGCTAAAG CAACAATTGC TGGGAAAGTA 
AATGATGTCC TTATAGATGC AACGCTCCCT ATAAAAAATG ATTCCAAAGT TGTAATCATT 
ACATCAAAAG ATAAAGAAGG AATTGAAATA ATAAGACATT CCTTTGCTCA CCTTATTGGT 
CATGCAGTTA AACAAATTTA CTCTGATATT AAAATGGCAA TTGGGCCTGT AATTGAGGAT 
GGTTTTTATT ACGATATTTT TTCTGAACAA AGATTTACTC CTGAAGATTT AATAAAAATC 
GAAAATAGAA TAAATAAATT AATAAAAACG AACTATGACG TTGAAATTTT ACAAGTTTCT 
AAAGAAGAGG CAATTAAAAC TTTTAAGGAA AGAGATGAGA CTTTTAAATT ACGAATAATT 
GAAGAAATTC CTGAAGAAGG TCTCATCAAT TTATACAAGC ACGAAGAATA TATCGACATG 
TGTAGAGGGC CTCACGTACC CAACACAAGA CATTTGAGAC ACTTTAAGTT ACTTAAATTA 
TCAGGCTCAT ACTGGAGAGG TAATAGTGAG AATGAAGCAT TACAGAGAAT ATATGGAACT 
GCATGGGCTA AAGAAAAAGA ACTCAAAGAT TATTTAACAA GAATTGAAGA GGCGGAAAAA 
AGAGATCATA GAAAACTTGG AAAAAAACAT TCACTTTTTC ATATTCAAGA AGAATCTCCA 
GGAATGATTT TTTGGCATCC AAATGGATGG ACAATCTACC AAGTGCTTGA AAAATACATA 
AGAGAAATAC TTAAAAAAAA TGATTATTTA GAAATCAAAA CACCACAAGC TGTTGATAAA 
TCTCTCTGGG AAAAATCCGG TCATTGGGAA AAATTTAGAG ACGATATGTT TACTACTGCG 
TCAGAAAATC GAACATATGC AATAAAACCA ATGAATTGTC CATGCCATAT TCAATTATTT 
AATCAAGGTT TAAAAAGTTA TAAGGATTTA CCTATTCGTC TTGCTGAATT TGGTTCTTGT 
CACAGAAATG AGCCCTCTGG TGCACTGCAC GGCTTAATGA GAGTAAGAAA CTTTACTCAA 
GATGATGCGC ACATATTTTG CAAAGAAGAG CAGATTCAAG AAGAGGTGTC CACATTTATA 
GATCTTGTTT TCGAGGTTTA TAAAACTTTT GGTTTTGATG AAATAATTAT CAAATTATCA 
ACCCGTCCTG AAAAAAGGGT AGGTAGTGAA GAGATTTGGG ATAAATCAGA AGAGGCCCTT 
ACCAAAGCTC TCGATAATAA GAATCTAAAA TGGGAACTCC AACCTGGAGA AGGTGCTTTT 
TATGGTCCAA AAATAGAATT CTCGTTAAAA GATTGTCTTA ATAGAGTCTG GCAGTGCGGA 
ACCATTCAGG TTGATTTTTC AATGCCTATT AGATTGGAAG CAACTTATGT AGATATTGAT 
AATGAAAAAA GAAATCCAGT TATGCTTCAT AGGGCAATTT TAGGATCCTT TGAAAGATTT 
ATCGGAATCT TAATTGAACA ATATGAGGCG AAATTTCCGA TTTGGCTTGC TCCTTATCAA 
ATAATTTTGT TGAGTATTAC CGATAGAAAT AATGAAAAGT GTTTAAAATT TAATGAATTA 
ATAAATAATA ATGGTTACCG ATCAAAAGTT GATATTAGGA ATGAAAAGAT AGGATACAAA 
ATAAGGGAGG CAACTATAAG TAGAATTCCC TTAATTGCAG TAATAGGTGA TAAAGAAGAG 
GAAATTGATT CAGTAGCTCT AAGAGCTTTG GATGGAACAA ATTTAGGAAT TTTCAATTTA 
CCTAATCTCT ATAAATTAAT GGATGAATTA ATAGATAAAA AAGGTCGAAC GGAATAA 

 

Protein sequence

MPIITLPDGS KKVFEKSVTI LEIAQSIGAG LAKATIAGKV NDVLIDATLP IKNDSKVVII 
TSKDKEGIEI IRHSFAHLIG HAVKQIYSDI KMAIGPVIED GFYYDIFSEQ RFTPEDLIKI 
ENRINKLIKT NYDVEILQVS KEEAIKTFKE RDETFKLRII EEIPEEGLIN LYKHEEYIDM 
CRGPHVPNTR HLRHFKLLKL SGSYWRGNSE NEALQRIYGT AWAKEKELKD YLTRIEEAEK 
RDHRKLGKKH SLFHIQEESP GMIFWHPNGW TIYQVLEKYI REILKKNDYL EIKTPQAVDK 
SLWEKSGHWE KFRDDMFTTA SENRTYAIKP MNCPCHIQLF NQGLKSYKDL PIRLAEFGSC 
HRNEPSGALH GLMRVRNFTQ DDAHIFCKEE QIQEEVSTFI DLVFEVYKTF GFDEIIIKLS 
TRPEKRVGSE EIWDKSEEAL TKALDNKNLK WELQPGEGAF YGPKIEFSLK DCLNRVWQCG 
TIQVDFSMPI RLEATYVDID NEKRNPVMLH RAILGSFERF IGILIEQYEA KFPIWLAPYQ 
IILLSITDRN NEKCLKFNEL INNNGYRSKV DIRNEKIGYK IREATISRIP LIAVIGDKEE 
EIDSVALRAL DGTNLGIFNL PNLYKLMDEL IDKKGRTE