Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0563 |
Symbol | |
ID | 3765362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 524832 |
End bp | 525515 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 637797083 |
Product | hypothetical protein |
Protein accession | YP_397060 |
Protein GI | 78778948 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.559548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTCTAAAA TCTCAATTAT CATTCCAACT ATCAATGAAG CCAATAATTT GCCATTATTG CTTTCAGACT TGTCAATTAT TCAGAAAGAG GGCGAAATTA TTATTGTTGA CTGTGGTAGT GAAGATAAAA CTATTGATAT CGCAAATATT TATGGAGCAA AAGTATACAA ATCTAAAGAA AGAAATCGAG GTTTACAATT AGATATGGGT GCCAAGCATT CAAAAGGGGA CTGGCTCATT TTTTTGCATG CGGACACAAG ATTAACTCAT GATTGGTTTA GAAAAATAAA TTCAATTTTA AAGGGAGACA AAAATTATAT TTACTATTTT AAATTTAAAA TTAATCAGAA AAAGATAATT TATAGAGTTC TCGAGATTCT TGTAAATTTT AGAAGTCAAT ATTTTAAAAA ACCTTATGGT GATCAAGGTT TAATAATTAA TAGAAGGACT TATTTTAAGA ATAATGGTTT TAGAAAGATA CCTTTAATGG AAGACGTAGA TTTCTTAAGG AGATTAAATA ATAAAAAAAA TTTAAAACAA TTAAATCTAC CTATTTTCAT AAGTTCAAGA AAATGGGAAA GAACTAATAT TTTTCTCCAA GCACTTAAGA ACTGGAAATT TAGAAGAAGA TGGTTAAAAG GAGAATCGAT AAAATCTATA TATTCTGACT ACTACAAAAA ATGA
|
Protein sequence | MSKISIIIPT INEANNLPLL LSDLSIIQKE GEIIIVDCGS EDKTIDIANI YGAKVYKSKE RNRGLQLDMG AKHSKGDWLI FLHADTRLTH DWFRKINSIL KGDKNYIYYF KFKINQKKII YRVLEILVNF RSQYFKKPYG DQGLIINRRT YFKNNGFRKI PLMEDVDFLR RLNNKKNLKQ LNLPIFISSR KWERTNIFLQ ALKNWKFRRR WLKGESIKSI YSDYYKK
|
| |