Gene PMT9312_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0563 
Symbol 
ID3765362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp524832 
End bp525515 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content27% 
IMG OID637797083 
Producthypothetical protein 
Protein accessionYP_397060 
Protein GI78778948 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.559548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTAAAA TCTCAATTAT CATTCCAACT ATCAATGAAG CCAATAATTT GCCATTATTG 
CTTTCAGACT TGTCAATTAT TCAGAAAGAG GGCGAAATTA TTATTGTTGA CTGTGGTAGT
GAAGATAAAA CTATTGATAT CGCAAATATT TATGGAGCAA AAGTATACAA ATCTAAAGAA
AGAAATCGAG GTTTACAATT AGATATGGGT GCCAAGCATT CAAAAGGGGA CTGGCTCATT
TTTTTGCATG CGGACACAAG ATTAACTCAT GATTGGTTTA GAAAAATAAA TTCAATTTTA
AAGGGAGACA AAAATTATAT TTACTATTTT AAATTTAAAA TTAATCAGAA AAAGATAATT
TATAGAGTTC TCGAGATTCT TGTAAATTTT AGAAGTCAAT ATTTTAAAAA ACCTTATGGT
GATCAAGGTT TAATAATTAA TAGAAGGACT TATTTTAAGA ATAATGGTTT TAGAAAGATA
CCTTTAATGG AAGACGTAGA TTTCTTAAGG AGATTAAATA ATAAAAAAAA TTTAAAACAA
TTAAATCTAC CTATTTTCAT AAGTTCAAGA AAATGGGAAA GAACTAATAT TTTTCTCCAA
GCACTTAAGA ACTGGAAATT TAGAAGAAGA TGGTTAAAAG GAGAATCGAT AAAATCTATA
TATTCTGACT ACTACAAAAA ATGA
 
Protein sequence
MSKISIIIPT INEANNLPLL LSDLSIIQKE GEIIIVDCGS EDKTIDIANI YGAKVYKSKE 
RNRGLQLDMG AKHSKGDWLI FLHADTRLTH DWFRKINSIL KGDKNYIYYF KFKINQKKII
YRVLEILVNF RSQYFKKPYG DQGLIINRRT YFKNNGFRKI PLMEDVDFLR RLNNKKNLKQ
LNLPIFISSR KWERTNIFLQ ALKNWKFRRR WLKGESIKSI YSDYYKK