| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0550 |
|---|
| Symbol | rbcL |
|---|
| ID | 3765349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 513733 |
|---|
| End bp | 515148 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637797070 |
|---|
| Product | ribulose bisophosphate carboxylase |
|---|
| Protein accession | YP_397047 |
|---|
| Protein GI | 78778935 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGA AGTATGATGC AGGGGTAAAG GAGTACAGAG ATACCTACTG GACTCCTGAA
TATGTACCCC TAGACACCGA TTTACTAGCC TGTTTCAAAT GTACAGGTCA AGAAGGTGTT
CCAAGAGAAG AAGTTGCAGC AGCTGTTGCA GCGGAATCTT CAACAGGTAC TTGGTCAACA
GTTTGGTCCG AGTTACTTAC AGACTTAGAA TTTTATAAAG GACGTTGTTA TCGAATTGAA
GACGTTCCAG GAGATCCTGA AGCTTTTTAT GCTTTTATCG CATATCCTCT AGATCTTTTT
GAAGAAGGTT CAATTACAAA CGTATTAACA TCTCTAGTAG GAAACGTTTT TGGATTTAAA
GCTCTAAGAC ATTTACGTCT TGAAGATATT AGATTCCCAA TTGCTTTCAT CAAAACTTGC
GGTGGTCCAC CAAATGGAAT CGTAGTTGAA AGAGATCGTT TAAACAAATA CGGAAGACCT
CTTCTTGGTT GTACCATTAA ACCTAAATTA GGCTTATCTG GTAAAAACTA TGGTCGAGTT
GTATATGAAT GTCTTAGAGG CGGTCTTGAT TTAACGAAGG ATGACGAGAA TATTAATTCT
CAACCATTCC AGCGTTGGAG AGAAAGATTT GAGTTTGTTG CAGAAGCAGT TAAGCTCGCT
CAGCAAGAAA CTGGAGAAGT TAAAGGTCAC TACCTAAACT GTACTGCTAA CACTCCTGAA
GAACTTTATG AACGAGCTGA ATTTGCAAAA GAGCTAGATA TGCCAATCAT CATGCATGAT
TATATAACTG GTGGTTTTAC TGCAAATACT GGATTAGCAA ACTGGTGTCG TAAAAATGGC
ATGCTTCTGC ACATTCATAG AGCTATGCAT GCTGTTATTG ATAGACATCC AAAGCATGGT
ATTCATTTCA GAGTTCTAGC AAAATGTTTG AGACTCTCCG GAGGAGATCA ATTGCATACT
GGAACTGTTG TTGGAAAACT AGAAGGTGAT CGTCAAACAA CTCTTGGCTA CATTGACAAC
TTAAGAGAGT CATTTGTTCC TGAAGATAGA TCAAGAGGTA ACTTCTTTGA TCAAGATTGG
GGTTCAATGC CAGGAGTATT TGCTGTCGCA TCAGGTGGTA TTCACGTATG GCATATGCCT
GCACTTTTAG CGATTTTTGG AGATGATTCT TGTCTTCAGT TCGGTGGAGG AACACATGGC
CATCCATGGG GTTCAGCTGC TGGAGCTGCA GCCAACAGAG TTGCTTTAGA AGCTTGTGTA
AAAGCACGTA ATGCGGGTCG CGAAATCGAA AAAGAGAGTA GAGACATTCT TATGGAAGCT
GCTAAGCATA GTCCTGAATT AGCTATTGCT CTCGAAACTT GGAAGGAAAT CAAGTTTGAG
TTTGATACCG TCGACAAGCT TGACGTTCAA GGTTAA
|
|---|
| Protein sequence | MSKKYDAGVK EYRDTYWTPE YVPLDTDLLA CFKCTGQEGV PREEVAAAVA AESSTGTWST
VWSELLTDLE FYKGRCYRIE DVPGDPEAFY AFIAYPLDLF EEGSITNVLT SLVGNVFGFK
ALRHLRLEDI RFPIAFIKTC GGPPNGIVVE RDRLNKYGRP LLGCTIKPKL GLSGKNYGRV
VYECLRGGLD LTKDDENINS QPFQRWRERF EFVAEAVKLA QQETGEVKGH YLNCTANTPE
ELYERAEFAK ELDMPIIMHD YITGGFTANT GLANWCRKNG MLLHIHRAMH AVIDRHPKHG
IHFRVLAKCL RLSGGDQLHT GTVVGKLEGD RQTTLGYIDN LRESFVPEDR SRGNFFDQDW
GSMPGVFAVA SGGIHVWHMP ALLAIFGDDS CLQFGGGTHG HPWGSAAGAA ANRVALEACV
KARNAGREIE KESRDILMEA AKHSPELAIA LETWKEIKFE FDTVDKLDVQ G
|
|---|
| |