Gene PMT9312_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0549 
Symbol 
ID3765348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp513352 
End bp513663 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content48% 
IMG OID637797069 
Productcarboxysome shell protein CsoS1 
Protein accessionYP_397046 
Protein GI78778934 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACAG AAACAATGGG TATCGCTCTC GGCATGATCG AGACACGCGG ACTTGTACCT 
GCAATCGAAG CAGCAGACGC AATGACCAAG GCAGCAGAAG TTCGTCTTAT TGGTCGTGAA
TTCGTAGGTG GCGGTTATGT CACAGTATTA GTTAGAGGCG AAACAGGAGC AGTTAACGCA
GCTGTTAGAG CTGGTGCTGA TGCTTGTGAA AGAGTTGGTG ATGGTTTAGT CGCAGCTCAC
ATTATTGCTC GTCCTCACAG AGAAGTTGAA CCTGCCCTAG GTAACGGTGA ATTTCTTGGT
CAAAAGGACT AA
 
Protein sequence
MATETMGIAL GMIETRGLVP AIEAADAMTK AAEVRLIGRE FVGGGYVTVL VRGETGAVNA 
AVRAGADACE RVGDGLVAAH IIARPHREVE PALGNGEFLG QKD