Gene PMT9312_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0539 
Symbol 
ID3765338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp504693 
End bp505379 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content30% 
IMG OID637797059 
Productprotein ligase 
Protein accessionYP_397036 
Protein GI78778924 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.728191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGAATAG AAAATCAAGC TTTAATTTTT TCAACAAATA ATTTACCTGG ATTTGATCAA 
ATGGCTTTAG ATTTAAATTC TTTAAATCAG ACAATTTCTA ATCCTGAAAT CATTTTCACA 
TTAAGATTCT ACTATTGGAC TGGGGATTGG CTTTCAATTG GCTATCACCA AAAGGAAATT 
CCTCCTCATT GGGAAAAATT ATTATTTAAT AAGGAAATTA ACATTGTAAG ACGTCCCTCT 
GGAGGGGGAG CTGTTTTGCA TTCGGGAGGA ATAACATATG CATTAACATT TAAAAAAAGT 
CACTATAAAA TACTAAGTTA TGAACTGGTT AACAAATGGT TAATTAAGAG TTTTCGAGAA 
TTAGGTCTAA AGTTACAAAA TGGCAAATTA CGAAAATCGC CAATAGCAAC TAATTGTTTT 
GGGAGTAAAT TAATTTCTGA TTTAGTTGAT CAGGATGGGT TCAAGAGAGT AGGAAGTGCA 
CAATATCGAA AAAAAGGTGC CTTCCTTCAG CATGGAGAGA TTCAAACAAA TCCCTCAAAA 
GATTTATGGT TAAAATTATT TCAAGAAGAA GCTCCACCTA AATTAAATCT AGATCTTACA 
AATGATGAAA TAGTTCATCA TTTAAGAAAT TCATTCCTAG AGAATAAATC TAATATAAGA 
TTCAAAAATG TTGCCATTGA TAATTAA
 
Protein sequence
MGIENQALIF STNNLPGFDQ MALDLNSLNQ TISNPEIIFT LRFYYWTGDW LSIGYHQKEI 
PPHWEKLLFN KEINIVRRPS GGGAVLHSGG ITYALTFKKS HYKILSYELV NKWLIKSFRE 
LGLKLQNGKL RKSPIATNCF GSKLISDLVD QDGFKRVGSA QYRKKGAFLQ HGEIQTNPSK 
DLWLKLFQEE APPKLNLDLT NDEIVHHLRN SFLENKSNIR FKNVAIDN