Gene PMT9312_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0519 
Symbol 
ID3765318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp485328 
End bp486329 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content32% 
IMG OID637797039 
Producttransaldolase B 
Protein accessionYP_397016 
Protein GI78778904 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.882158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA TTTTAGAACA ATTGTCCTCA ATGACTGTTG TTGTTGCAGA TACTGGTGAT 
TTAGATTCGA TAAAAAAATT TCAGCCAAGG GACGCTACTA CTAATCCATC TTTAATACTA
GCTGCAGCTA AGAACCCTGA TTATGTGAAA TTAATTGATA AAGCTATAGA AAGTTCAGAA
AATACATTGC CCAATGGATT CTCTGAAATT GAATTAATTA AAGAAACTGT TGACCAAGTT
TCAGTATTTT TTGGAAAAGA AATATTGAAA ATTATTTCAG GGCGCGTATC GACAGAAGTT
GACGCAAGAC TTAGCTTTGA CACCGAAGCT ACGGTAAAAA AAGCAAGAAA ATTAATCAAT
CTTTACAAAA ATTTTGGCAT TGAAAAGGAA AGAATCTTAA TTAAGATTGC CGCAACGTGG
GAAGGAATTA AAGCAGCTGA AATTTTGGAA AAAGAGGGTA TTAAATGCAA CTTAACCTTA
CTTTTTAACT TCTGCCAAGC GGTAACTTGT GCGAATGCAA ATATAACCTT AATTTCTCCG
TTCGTTGGTC GTATATTAGA TTGGCATAAA GCAAAAACTG GTAAAACTAG TTTTATAGGT
GCTGAAGACC CAGGTGTTAT TTCGGTTACG CAGATTTATA AGTATTTTAA AGAAAAAGGA
TTCAAGACAG AAGTAATGGG AGCTAGTTTT AGAAATCTTG ATGAAATAAA AGAATTAGCA
GGTTGCGATC TTTTAACAAT AGCACCAAAA TTTCTAGAGG AACTAAAAAG AGAAAAAGGA
GTTTTGATTA GGAAATTAGA TGCAAGTACC AAAATAAATA ATTCTATTGA CTATAAATTT
GAGGAAAAAG ACTTTAGATT GAGTATGTTA GAAGATCAAA TGGCCAGTGA GAAGCTTAGT
GAAGGTATCA CAGGATTCAG TAAGGCTATA GAAGAATTAG AAGAACTCCT AATAGAGAGA
TTATCAGAAA TGAAAAATCA TAAATTAATT TCTGCCAACT AA
 
Protein sequence
MKSILEQLSS MTVVVADTGD LDSIKKFQPR DATTNPSLIL AAAKNPDYVK LIDKAIESSE 
NTLPNGFSEI ELIKETVDQV SVFFGKEILK IISGRVSTEV DARLSFDTEA TVKKARKLIN
LYKNFGIEKE RILIKIAATW EGIKAAEILE KEGIKCNLTL LFNFCQAVTC ANANITLISP
FVGRILDWHK AKTGKTSFIG AEDPGVISVT QIYKYFKEKG FKTEVMGASF RNLDEIKELA
GCDLLTIAPK FLEELKREKG VLIRKLDAST KINNSIDYKF EEKDFRLSML EDQMASEKLS
EGITGFSKAI EELEELLIER LSEMKNHKLI SAN