| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0518 |
|---|
| Symbol | |
|---|
| ID | 3765317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 483485 |
|---|
| End bp | 485236 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637797038 |
|---|
| Product | putative peptidoglycan synthetase (pbp transpeptidase domain) |
|---|
| Protein accession | YP_397015 |
|---|
| Protein GI | 78778903 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.289725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAT ATAAAAAAAT TGTTCAAATT ATACCTCTTG ATAAAAGGAG ATTTAAATTA
CTCTATATTT TTAGCTTGCT AATGATATTT TGTTTGTTTG GTAGGTTAGT TAACTTGCAA
GTCTTTAATG CCTCAGATTT GAAAAAGAAA GCGAGATTAA TACAATCTTC TACAACTAAC
GCCTTGAAAA AAAGGAGATC GATTGTTGAC AGAAATAATA GACTCATTGC TTACGATAAA
CCCCTTTATA AGCTGTGGGC TCATCCAAGA TATTTTAATT TTCCTGGTGA TTCTATTAAA
GAAGTTCGTA GCATTGAAGA AGTTGCGAAA AAATTATCAC CTATTTTGGA TATTAAAGAT
AAAAAACTCT TGGAAAAATT TAATGACAAA AGCAGCGGCA TCATGCTTTT GGATAAAATT
TCTGAAGAAA AAGCAGAAAA GATTAAAAAC CTTCAAATAA GCGGACTTGA TTTGTTTAAA
TACTCTCAAA GATATTATCC ACAAGGGGAA CTTTATTCCA ATCTTGTTGG TTTTGTTAAT
GATGAGAATA AAGGTTCAGC AGGTTTAGAG CTTCATTTGG ATAATCAAAT TAAAGTTTTT
AATAAAAGTA ATCTAATAAA AAGAGGAGGA GATGGCACCC CTCTGCCTGA TAATTCAGCT
CCAGGTGATT TTATTTATGA TTACAAGAGT TTAGGTCTAA CTATAGATTC AAAATTACAG
AAAGCGTCAT TAAATGCATT GTCAAAGCAA ATAAGTAAAT GGAAAGCAAA GAAGGGATTT
GCCATGGTTA TGGATGTTAA TAATGGTCAG ATTCTTTCCT TGGTTGCAGT GCCTTCATAT
GATCCGAATA AATTTTGGCA GTATGATTCT GAACTCTTTA GAGGTTGGTA TTCTCAAGAT
TTATTTGAGC CGGGTTCAAC TTTTAAGCCT ATTAATCTTG CCTTAGCGTT AGAAGAAAAA
GTAATCCAAA AAGATGGTTT AGTTGAAGAT AGCGGAAAGA TTAATGTTGG AGGATGGACA
CTTTCTAATT GGGATAAAAA AGGTAATGGA TACATTGATT ATCCAAAAGT ATTGCAGGTT
TCAAGTAATG TTGGGATGGT AAAAATAATG CAAAATTTAG AGCCTAGAGT TTATTGGGAT
TGGCTGAAGA ATTTAGGTAT AAATAAAAAT TTAGAGACTG ACTTATATGA ATCAACTGCA
GGCCAATTAA AGAGAAAAGA TTTATTCGTA AATCAATCAA TAGAGCCTGC TGTGGCTTCT
TTTGGGAAGG GTTTCTCAAT CTCGCCACTT AAATTGGCTC AACTTCATGC GGCTCTAGCT
AATGGCGGTT TTGAAGTTAC TCCCCATGTA ACCTCAAATT TCAAAGAAAG AGTAAATCAA
AACTCAAAAA AACAATTTTT TTCTCCTGAG GTCTCTAAAA TTGTTCTTGA ATGGATGGAG
AGCGTGGTTG ATAAAGGTAG TGGATCTGGA GTGAAAATTG AGGGTTATAG AATAGCTGGA
AAAACAGGGA CTTCTCAAAA AGCTTTAAAT GGTGTGTATA CAAGTAAAAA AGTTTGTAGT
TTTGTCGCCA CCTTACCAGT AAATGATCCG AAATATGTTG TCCTTGTTGT CGTTGATGAG
CCATCAAAAT TATATGCATA TGGTTCAACT GTTGCAGTAC CAGTTGCGAA AGAAATTATC
GAGAGTTTAA TAGTAATTGA AAAAATACCT CCTAAGGTTA AAGGTCATGG AATGATTGTT
AAAAAACTCT AA
|
|---|
| Protein sequence | MRKYKKIVQI IPLDKRRFKL LYIFSLLMIF CLFGRLVNLQ VFNASDLKKK ARLIQSSTTN
ALKKRRSIVD RNNRLIAYDK PLYKLWAHPR YFNFPGDSIK EVRSIEEVAK KLSPILDIKD
KKLLEKFNDK SSGIMLLDKI SEEKAEKIKN LQISGLDLFK YSQRYYPQGE LYSNLVGFVN
DENKGSAGLE LHLDNQIKVF NKSNLIKRGG DGTPLPDNSA PGDFIYDYKS LGLTIDSKLQ
KASLNALSKQ ISKWKAKKGF AMVMDVNNGQ ILSLVAVPSY DPNKFWQYDS ELFRGWYSQD
LFEPGSTFKP INLALALEEK VIQKDGLVED SGKINVGGWT LSNWDKKGNG YIDYPKVLQV
SSNVGMVKIM QNLEPRVYWD WLKNLGINKN LETDLYESTA GQLKRKDLFV NQSIEPAVAS
FGKGFSISPL KLAQLHAALA NGGFEVTPHV TSNFKERVNQ NSKKQFFSPE VSKIVLEWME
SVVDKGSGSG VKIEGYRIAG KTGTSQKALN GVYTSKKVCS FVATLPVNDP KYVVLVVVDE
PSKLYAYGST VAVPVAKEII ESLIVIEKIP PKVKGHGMIV KKL
|
|---|
| |