Gene PMT9312_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0488 
Symbol 
ID3765287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp455861 
End bp457087 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content32% 
IMG OID637797008 
Producthypothetical protein 
Protein accessionYP_396985 
Protein GI78778873 
COG category[S] Function unknown 
COG ID[COG1641] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00299] conserved hypothetical protein TIGR00299 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGATG TTTTAATTGA ATGTTCTCCA GGTATCTCTG GAGATATGTT GTTAGGGGCT 
TTTTATGATT TAGGGGTGCC TAAAAAAGTC ATTGAACAAC CACTTATTGA TCTTGGATTA
AAGGATTTAT ATCATCTCGA GTTTAAAGAG TCAAAAAGTT GTTCAATCCG AGGGATCAAG
GCAAAGGTTG AGAATATTGA TAGCAGTCCT ATCAAAAGAA CTTGGAGAAC TATTAAAGAA
CTTATTTCAA ATGGGCACTT AGAAGATAAA TTAAAGCAAA TAATTTATGA AGTTTTTGAA
TCCTTAGCAA ATGCAGAAGG AAAAGTTCAT GGTGTCAAAT CTGAGAATGT TCATTTTCAT
GAAATTGGAG CTATAGACTC ATTAGTGGAT ATCATAGGAG TATGTGCTGC CTTGAATTAC
TTAAATCCAA ATAAGGTTTA TTGTAATGAA CCAATGTTGG GGAAAGGTTT TGTTCAAACT
GAACATGGAA AATTATCTGT ACCACCTCCT GCTGTAATAG AACTAATAAG ACAAAAGAAT
ATAAAGGTTT TATCAAGCTT TGACTCAATA GAAGGGGAAC TATCTACACC AACTGGCATT
GCTTTACTTT CTAATTTAGT CGACTATCTG CGACCTCCTT CAAAATATTC TATTAACTCT
TATGGAGTAG GCATTGGTAA CTTAAAATTT TCATTCCCTA ATTTGGTAAG AGTTTATAAA
ATTTCTTCAT TTGAGGATTC TTCTTGTAAT CAACAAATTA ATCCAAAGTG TGAAGAGATA
TCTGTTCAAG AAGCATGGAT AGATGATCAA ACACCTGAAG ATATATCTAA TTTTGTAGAG
AAACTAAGAA TTGAGGGAGC TTACGACGTT TCTTATCAAT CTATCTACAT GAAAAAGAAT
AGAATTGGAT TTTCTATTCA AGCAATCTTA CCAATAGAGA AAAGAGAATA TTTTAGGCGA
TTATGGTTTG ATTATTCTAA TACTATTGGA GTGCGTGAAA GGACCCAATC TAGATGGATA
TTACTTAGAA GGAAAGGAGA ATGTACAACG ACCTTTGGAA ATATAAAAGT TAAACAGACT
TTGAAACCAG ATGGATCAAT AACTATGAAA CCAGAAAATG ACGAAGTCAT GAGATTAAAA
CTAGAGCATA AAATATCAAC TGAGGAAATA AGAAAAATAA TAAAAGAGTC AAGTAAAGAA
TTTAAAGCAT TTGAAAATTG GAAATGA
 
Protein sequence
MEDVLIECSP GISGDMLLGA FYDLGVPKKV IEQPLIDLGL KDLYHLEFKE SKSCSIRGIK 
AKVENIDSSP IKRTWRTIKE LISNGHLEDK LKQIIYEVFE SLANAEGKVH GVKSENVHFH
EIGAIDSLVD IIGVCAALNY LNPNKVYCNE PMLGKGFVQT EHGKLSVPPP AVIELIRQKN
IKVLSSFDSI EGELSTPTGI ALLSNLVDYL RPPSKYSINS YGVGIGNLKF SFPNLVRVYK
ISSFEDSSCN QQINPKCEEI SVQEAWIDDQ TPEDISNFVE KLRIEGAYDV SYQSIYMKKN
RIGFSIQAIL PIEKREYFRR LWFDYSNTIG VRERTQSRWI LLRRKGECTT TFGNIKVKQT
LKPDGSITMK PENDEVMRLK LEHKISTEEI RKIIKESSKE FKAFENWK