Gene PMT9312_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0484 
Symbol 
ID3765283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp452440 
End bp453744 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content40% 
IMG OID637797004 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_396981 
Protein GI78778869 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.765409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGACA TATTAAATTG CACCAAATCA GAAGAAATCT TTTCTGCTGC CCAAGAATTA 
ATGCCTGGGG GAGTAAGTTC CCCAGTAAGA GCTTTTAAAT CCGTCGGAGG TCAGCCGATT
GTTTTTGATA GAGTTAAAGG CCCTTTTGCT TGGGATATTG ATGGAAATAG ATATATTGAC
TACATAGGAA GTTGGGGGCC CGCTATATGT GGACATGCGC ATCCCGAAGT TACAACTGCA
CTACAGGAAG CAATTGAGAA AGGGACCAGT TTTGGAGCTC CTTGCGTTTT AGAGAACAAA
CTTGCTGAGA TGGTTATAGA TGCTGTCCCA TCTGTAGAAA TGGTTAGATT TGTTAATAGT
GGAACTGAAG CCTGCATGGC TGTTTTGAGG CTTATGAGAG CATTCACTGG GAGAGATAAA
GTTATTAAAT TCGACGGTTG CTATCACGGT CATGCAGACA TGTTTTTAGT GAAAGCCGGA
TCAGGTGTGG CCACTTTAGG TTTACCAGAT TCCCCAGGGG TGCCACGAAC AACAACTGCA
AATACACTAA CTGCTCCCTA CAATGATCTT GAAGCAGTTA AAAAATTATT TTCAGAAAAT
CCTGATGCCA TTTCGGGGGT CATTCTTGAG CCTATTGTTG GTAATGCTGG CTTTATTACT
CCTGAACCTG GATTCTTAGA AGGATTAAGG GAATTAACCA CTGAGAATGG ATCCTTATTA
GTTTTTGATG AAGTCATGAC TGGATTCAGA ATCAGTTATG GAGGCGCACA AGAAAAATTT
GGTGTTACTC CTGATTTAAC TACACTTGGA AAGGTAATTG GAGGCGGCTT ACCTGTCGGA
GCTTATGGAG GTAAGAAAGA AATAATGTCA ATGGTAGCTC CTTCAGGACC GGTCTACCAG
GCAGGTACTT TGAGCGGAAA CCCACTTGCA ATGACTGCTG GTATAAAGAC TCTTGAACTA
CTTAAACAAG AAGGTACCTA TGAGAAACTA GATGCAATAA CTTCTAGATT AATTGAAGGG
ATAATTCAGT CTGCCGAAAA TAATGGTATT GCTATTTACG GTGGAAGTGT AAGTGCTATG
TTTGGTTTTT TCTTATGTGA TGGGCCAGTT AGGAACTTTG ATGAAGCAAA AACAAATGAT
GCTAAACTTT TTGGAAAGTT ACATAGAGAG ATGCTTCGAA GAGGTGTTTA TCTTGCACCA
AGTCCATTTG AGGCTGGCTT CACATCACTC GCTCATAACG AAGAAGAAAT TGATAAAACA
ATCGAGGTAT TTGATCAATG CTTTAATACT ATAAAAAACC AATAA
 
Protein sequence
MTDILNCTKS EEIFSAAQEL MPGGVSSPVR AFKSVGGQPI VFDRVKGPFA WDIDGNRYID 
YIGSWGPAIC GHAHPEVTTA LQEAIEKGTS FGAPCVLENK LAEMVIDAVP SVEMVRFVNS
GTEACMAVLR LMRAFTGRDK VIKFDGCYHG HADMFLVKAG SGVATLGLPD SPGVPRTTTA
NTLTAPYNDL EAVKKLFSEN PDAISGVILE PIVGNAGFIT PEPGFLEGLR ELTTENGSLL
VFDEVMTGFR ISYGGAQEKF GVTPDLTTLG KVIGGGLPVG AYGGKKEIMS MVAPSGPVYQ
AGTLSGNPLA MTAGIKTLEL LKQEGTYEKL DAITSRLIEG IIQSAENNGI AIYGGSVSAM
FGFFLCDGPV RNFDEAKTND AKLFGKLHRE MLRRGVYLAP SPFEAGFTSL AHNEEEIDKT
IEVFDQCFNT IKNQ