Gene PMT9312_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0479 
Symbol 
ID3765278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp449015 
End bp450124 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content35% 
IMG OID637796999 
ProductBioD-like N-terminal domain of phosphotransacetylase 
Protein accessionYP_396976 
Protein GI78778864 
COG category[R] General function prediction only 
COG ID[COG0857] BioD-like N-terminal domain of phosphotransacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA TATTGTTAAT TGGTTCATGT GAGCCATTTA GTGGTAAGTC TGCATTGGTG 
CTTGGGATAG CAAAAAGAGT TTTACAGGAG AAAAAACAAG TACGTATTGG TAAACCACTA 
GCAACTTGTA TCGAACTTAC TAATCTACCT TCAATGTCTT ATGAAGGATT AATAGATGAT 
GATGTTAAAT TTATTGGATC TACTTTAAAT ATCAAAGAAG AGAATTTAAT TTCTTCAGTA 
GGATTATTAG ATAATATATC AGCTGAAAAA AGAATATTTA ATAAAGACTT GCTTCCAGGA 
AAAGGTTTCG ATCAAATTAA AGGATTGGTT AATGATTCTT TTGAAGGATT GAATATTCTT 
GAAGCGGCTG GTAGTCTTCA TGAAGGTATG ATTTATGGTT TAAGTCTCCC ACAACTAGCT 
GAAAGCTTAG ATGCGAAAGC CTTAATTGTA AATTTATGGG AAGATTGTAA AAGCGTAGAT 
GCATTACTAG ATGCAAAAAA ACAATTAGGG GAGCATTTGG CTGGAGTTGT ATTGAATGCA 
GTTCCGCCTC AAGAAGTCGA AAAAGTTAAA AATGAAATAA TACCTTCTCT TAAAGATTTG 
AATATTGAAG TATTTGGAGT GATGCCCAAG TCACCACTTC TCAGAAGTGT CACCGTCGGT 
GAGCTTGTAA GAAGACTAGA TGCCAAAGTA ATTTGTTGCC CTGAAAAAGA TCAATTACTT 
GTTGAGACAT TGAGTATTGG TGCAATGGGG GTAAATTCTG CAATGGAATT TTTCAGAAGA 
AGACGAAATA TGGCTGTGGT TACTGGAGCT GATAGAACTG ATATCCAACT TGCTGCTTTG 
GAAGCTTCTA CTCAATGTTT AATTTTAACT GGTATGGGAG AACCCCTATC ACAATTGATT 
CATAGAGCAG AAGAATTGGA GGTCCCAATT TTAAAGGTGG AATTAGATAC TCTCGCCTCT 
GTAGAAATTA TTGAACAAGC TTTTGGTCAT GTAAGAATAC ATGAATCAAT TAAAGCTTCT 
TATGCTGTTC AATTAGTTCA GGAGCATGTA AATCTAAAAA GAATTCTCGA AAAGATAGAT 
TTTCCCTGCA ATTTTCCAGA AAAATGCTAA
 
Protein sequence
MSDILLIGSC EPFSGKSALV LGIAKRVLQE KKQVRIGKPL ATCIELTNLP SMSYEGLIDD 
DVKFIGSTLN IKEENLISSV GLLDNISAEK RIFNKDLLPG KGFDQIKGLV NDSFEGLNIL 
EAAGSLHEGM IYGLSLPQLA ESLDAKALIV NLWEDCKSVD ALLDAKKQLG EHLAGVVLNA 
VPPQEVEKVK NEIIPSLKDL NIEVFGVMPK SPLLRSVTVG ELVRRLDAKV ICCPEKDQLL 
VETLSIGAMG VNSAMEFFRR RRNMAVVTGA DRTDIQLAAL EASTQCLILT GMGEPLSQLI 
HRAEELEVPI LKVELDTLAS VEIIEQAFGH VRIHESIKAS YAVQLVQEHV NLKRILEKID 
FPCNFPEKC