Gene PMT9312_0475 details

Gene Information

• Locus tag: PMT9312_0475
• Symbol: rplS
• ID: 3765274
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: -
• Start bp: 446405
• End bp: 446875
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637796995
• Product: 50S ribosomal protein L19
• Protein accession: YP_396972
• Protein GI: 78778860
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0335] Ribosomal protein L19
• TIGRFAM ID: [TIGR01024] ribosomal protein L19, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAAAG AGAAACAGGA AAATGAATTA GAAACCATTA TTAAAACTGA CGGATCAGTT 
GATGTCGCAG TTGAACAAAA AGAAAAAAAC TTGGTTTCTG AAACTACAAA AACTATAAGC 
GTTTCCAACC TTATCGAGGA ATTTGAGAAT GAACAATTAA AAAAAGAATT ACCTGAAATT 
TATGTTGGAG ACACTGTTAA AGTTGGAGTT AGAATTACAG AGGGTAATAA AGAAAGAGTT 
CAACCTTATG AAGGTGTTGT AATAGCTAAA AGACATGGAG GTATTCATCA GACAATTACA 
GTTAGAAGAA TTTTCCAAGG TATAGGTGTT GAAAGAGTAT TTATGCTACA TAGTCCACAA 
GTTGCCTCTC TAAAAGTTGA ACGTAGAGGT AAAGTAAGAA GAGCTAAGTT ATTCTATCTA 
AGAGATAGAG TAGGAAAAGC TACTCGCGTA AAACAACGCT TTGATCGTTA A 

 

Protein sequence

MAKEKQENEL ETIIKTDGSV DVAVEQKEKN LVSETTKTIS VSNLIEEFEN EQLKKELPEI 
YVGDTVKVGV RITEGNKERV QPYEGVVIAK RHGGIHQTIT VRRIFQGIGV ERVFMLHSPQ 
VASLKVERRG KVRRAKLFYL RDRVGKATRV KQRFDR