Gene PMT9312_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0470 
Symbol 
ID3765267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp441763 
End bp442833 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content35% 
IMG OID637796988 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_396967 
Protein GI78778855 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.257073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAG TTTTAGCTAT TGAAACAAGT TGTGATGAGA CATCTGTCTC AATAGTTTCT 
AATATTGGCA ATACTTTTAA AATTCATTCA AATATCATTG CATCTCAAAT TGAAGATCAT 
TCAAAATGGG GAGGAGTTGT TCCTGAACTT GCAGCTAGAA AGCATCTAGA GTTATTACCT 
TTTGTTTTAG AAAAGGCTTT AACAGAATCA AAAATCAAAA TTGAGGAAGT AGATTATATT 
GCATCAACTG TAGCTCCTGG ATTAGTTGGG TGTTTACGAG TTGGCTCTAT AACTGCAAGG 
TCACTTTGCA TGTTACATTC AAAGCCATTT TTGGGAATTC ATCATTTGGA GGGGCATTTA 
TCTTCAATTT TATTCTCAGA AAACTATCCA AAGAAATCTT TTCTTACATT ACTCGTTAGC 
GGTGGACATA CTGAATTGAT AAAGGTTGAT GATAGAAGGG GAATGCAAAG ACTTGGCAAA 
AGTTTTGATG ATGCCGCTGG AGAAGCCTTT GATAAAGTTG GAAGATTATT AGGTCTTAGT 
TATCCCGGAG GACCGGCAAT TGAAAAGATT GCTAAAAATG GAGATCCTAT GAAATTCAAT 
TTACCAAAAT GTAGAATTTC CGATAAAAAG GGTGGATTTC TTAAATATGA TTTCTCTTTT 
AGTGGTCTAA AAACTGCTGT ATTAAGATTA GTTGAGAAAA TAAATTTAGA TGGGAAGACT 
GTACCAGTTC CTGATATCGC TGCAAGTTTT GAAAGAGTAG TTGCAGAGGT CTTGGTTGAG 
AGAACTATAA GATGTGCTGA AGATCATAGC TTGGATAATG TTGTTGTAGT TGGGGGAGTG 
GCTGCTAATA ATACATTAAG AAAAATGATG ATTAGTGAAG CTAATAAAAA ATCTATTAAA 
GTTCACTTAG CTCCTCTTAA TCTTTGTACA GATAATGCGG CGATGATCGG TGCAGCGGCG 
TTGTTCAGGA TCAAATTTAA GGATCATTTA AGTTCCCTTA AATTAGGTGT CTCAGGAAGA 
CTATCAATTG AACAAGCAAA TACCCTTTAT GAAGAAAATC CTCCTTTCTA A
 
Protein sequence
MRKVLAIETS CDETSVSIVS NIGNTFKIHS NIIASQIEDH SKWGGVVPEL AARKHLELLP 
FVLEKALTES KIKIEEVDYI ASTVAPGLVG CLRVGSITAR SLCMLHSKPF LGIHHLEGHL 
SSILFSENYP KKSFLTLLVS GGHTELIKVD DRRGMQRLGK SFDDAAGEAF DKVGRLLGLS 
YPGGPAIEKI AKNGDPMKFN LPKCRISDKK GGFLKYDFSF SGLKTAVLRL VEKINLDGKT 
VPVPDIAASF ERVVAEVLVE RTIRCAEDHS LDNVVVVGGV AANNTLRKMM ISEANKKSIK 
VHLAPLNLCT DNAAMIGAAA LFRIKFKDHL SSLKLGVSGR LSIEQANTLY EENPPF