| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0449 |
|---|
| Symbol | |
|---|
| ID | 3765246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 425096 |
|---|
| End bp | 425920 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637796967 |
|---|
| Product | putative multidrug efflux ABC transporter |
|---|
| Protein accession | YP_396946 |
|---|
| Protein GI | 78778834 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.603097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAA ACAAGTATAA TTTATTTTTT TTATATCAAG AAACATTTGC CTTAACTAAG
AGATTATTTA TCCAACTAAA AAGAAGGCCA TCAACTCTTT TGGCTGGAAT ATTACAACCC
ATAATTTGGC TATTTTTATT TGGAGCCTTA TTCTCTAATG CTCCTGAAGG TTTTTTACCA
GGAGTTGATT CTTATGGAAA TTTTTTAGGA GCCGGACTTA TTGTTTTTAC TGCTTTTAGC
GGAGCCCTAA ACTCTGGTCT ACCTTTAATG TTTGATAGGG AGTTTGGATT TCTTAATAGA
TTACTTGTAG CTCCTTTAAC CAGTAGATTA TCTATAGTTT TATCCTCTTT CTTTTACATA
ACAATCCTGA GTTTTGTTCA GAGCATTGTA ATAATGATTG TTTCATACAT TTTGGGTTAT
GGATGGCCAA ATTTATATGG TTTAGGAATT GTGTTTACCA CACTAATTCT ATTAGTACTT
TTCGTGACAT CAATAAGTTT AAGTTTGGCA TTTGTTTTGC CTGGCCATAT TGAATTAATC
GCTCTAATAT TTGTAATAAA CTTACCTCTT CTTTTTGCTA GCACTGCTTT AGCTCCAATC
TCTTTTATGC CAAATTGGCT GGGGTGGCTA GCTTCATTAA ATCCATTGAC TTTTGCCATT
GAACCTATTA GGACTGCCTA TACACAAACT ATGGATTTAG AATTAGTGGC TTTACATGCC
CCATATGGTG ATTTAACTTG TAAGAGTTGT ATCTCAATTT TATTTTCTTT AACAGTTTGC
TCCTTGATTA TTATAAGACC TCTGTTAAAT AGAAAGTTAA ATTAA
|
|---|
| Protein sequence | MELNKYNLFF LYQETFALTK RLFIQLKRRP STLLAGILQP IIWLFLFGAL FSNAPEGFLP
GVDSYGNFLG AGLIVFTAFS GALNSGLPLM FDREFGFLNR LLVAPLTSRL SIVLSSFFYI
TILSFVQSIV IMIVSYILGY GWPNLYGLGI VFTTLILLVL FVTSISLSLA FVLPGHIELI
ALIFVINLPL LFASTALAPI SFMPNWLGWL ASLNPLTFAI EPIRTAYTQT MDLELVALHA
PYGDLTCKSC ISILFSLTVC SLIIIRPLLN RKLN
|
|---|
| |