Gene PMT9312_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0448 
Symbol 
ID3765245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp424031 
End bp425047 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content30% 
IMG OID637796966 
Productmultidrug ABC transporter 
Protein accessionYP_396945 
Protein GI78778833 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.380616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATA TAAAAGTTAA AGAGCTCTCA AAATCATATT CAGATATTGA GGCATTAAAA 
AATTTATCGA TGGAAATTGA AGCTGGCACA TTATTTGGAA TTCTAGGTCC AAATGGTGCA
GGTAAATCAA CATTAATAAA AATACTAGCT ACTTTAATTG AACCTGATAG TGGAGAAGTT
TTTATAAATG ATATTAATTT GATAAAAAAT TCAAGGAAAA TTAGAGAATT AATTGGTTAT
GTCGCTCAGG ACATTGCACT TGATAAAATA TTAACTGGAC GTGAGCTTTT GGATTTTCAA
TCAGATTTAT ATCACATCAA TAAAAACAAA AAAAATGAAA GGATACAAAA ATTAGTAGAT
CAATTAGAAA TGAATGATTG GATTGATCGT AAGTGCGGAA CTTATTCAGG GGGAATGAAA
AGAAGAATTG ATCTGGCAGC TGGACTTTTA CATTTGCCCC AAGTATTAAT TTTGGATGAA
CCTACTGTTG GTTTAGATAT TGAAAGTAGA AATATTATAT GGCAACTTTT GAAAGATTTG
AGAAATAATG GAATGACTAT TATTTTAAGC AGTCACTTTC TCGATGAAAT AGATAAATTA
GCAGACAGAT TAGTGATAAT TGATAATGGA AGAGTTATAG CACAAGGTAA TCCTGCAGAA
CTTAAAAATA AATTAGGAGG AGATAGAATA ACTTTGAAAG TTCAAGAATT TAGTAATCAA
GAAGAAGCAG AAAATATATG TCAGATTTTA TCTTCAATAG ATGGAATTAG TCAGATTATC
ATTAATGAAG CACAGGGTTT TTCAATAAAT TTTGTGGCAG ATAAGGAAAA AGATTTACTT
ACGAAGCTCA AAGTGGAATT AGCCTTTTCA AAGTTTGAGA TTTTTTCTCT TACCCAAAGT
CAGCCAAGCT TGGATGATGT ATATCTTCAG GCAACTGGGA AAACATTATT AGATGCCGAA
ATTTCAATGG CAGGTAAAAG AGACCTTAAA AAAGAATCCA AGCAATCAAT GCGGTAA
 
Protein sequence
MNYIKVKELS KSYSDIEALK NLSMEIEAGT LFGILGPNGA GKSTLIKILA TLIEPDSGEV 
FINDINLIKN SRKIRELIGY VAQDIALDKI LTGRELLDFQ SDLYHINKNK KNERIQKLVD
QLEMNDWIDR KCGTYSGGMK RRIDLAAGLL HLPQVLILDE PTVGLDIESR NIIWQLLKDL
RNNGMTIILS SHFLDEIDKL ADRLVIIDNG RVIAQGNPAE LKNKLGGDRI TLKVQEFSNQ
EEAENICQIL SSIDGISQII INEAQGFSIN FVADKEKDLL TKLKVELAFS KFEIFSLTQS
QPSLDDVYLQ ATGKTLLDAE ISMAGKRDLK KESKQSMR