Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0448 |
Symbol | |
ID | 3765245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 424031 |
End bp | 425047 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637796966 |
Product | multidrug ABC transporter |
Protein accession | YP_396945 |
Protein GI | 78778833 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.380616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTATA TAAAAGTTAA AGAGCTCTCA AAATCATATT CAGATATTGA GGCATTAAAA AATTTATCGA TGGAAATTGA AGCTGGCACA TTATTTGGAA TTCTAGGTCC AAATGGTGCA GGTAAATCAA CATTAATAAA AATACTAGCT ACTTTAATTG AACCTGATAG TGGAGAAGTT TTTATAAATG ATATTAATTT GATAAAAAAT TCAAGGAAAA TTAGAGAATT AATTGGTTAT GTCGCTCAGG ACATTGCACT TGATAAAATA TTAACTGGAC GTGAGCTTTT GGATTTTCAA TCAGATTTAT ATCACATCAA TAAAAACAAA AAAAATGAAA GGATACAAAA ATTAGTAGAT CAATTAGAAA TGAATGATTG GATTGATCGT AAGTGCGGAA CTTATTCAGG GGGAATGAAA AGAAGAATTG ATCTGGCAGC TGGACTTTTA CATTTGCCCC AAGTATTAAT TTTGGATGAA CCTACTGTTG GTTTAGATAT TGAAAGTAGA AATATTATAT GGCAACTTTT GAAAGATTTG AGAAATAATG GAATGACTAT TATTTTAAGC AGTCACTTTC TCGATGAAAT AGATAAATTA GCAGACAGAT TAGTGATAAT TGATAATGGA AGAGTTATAG CACAAGGTAA TCCTGCAGAA CTTAAAAATA AATTAGGAGG AGATAGAATA ACTTTGAAAG TTCAAGAATT TAGTAATCAA GAAGAAGCAG AAAATATATG TCAGATTTTA TCTTCAATAG ATGGAATTAG TCAGATTATC ATTAATGAAG CACAGGGTTT TTCAATAAAT TTTGTGGCAG ATAAGGAAAA AGATTTACTT ACGAAGCTCA AAGTGGAATT AGCCTTTTCA AAGTTTGAGA TTTTTTCTCT TACCCAAAGT CAGCCAAGCT TGGATGATGT ATATCTTCAG GCAACTGGGA AAACATTATT AGATGCCGAA ATTTCAATGG CAGGTAAAAG AGACCTTAAA AAAGAATCCA AGCAATCAAT GCGGTAA
|
Protein sequence | MNYIKVKELS KSYSDIEALK NLSMEIEAGT LFGILGPNGA GKSTLIKILA TLIEPDSGEV FINDINLIKN SRKIRELIGY VAQDIALDKI LTGRELLDFQ SDLYHINKNK KNERIQKLVD QLEMNDWIDR KCGTYSGGMK RRIDLAAGLL HLPQVLILDE PTVGLDIESR NIIWQLLKDL RNNGMTIILS SHFLDEIDKL ADRLVIIDNG RVIAQGNPAE LKNKLGGDRI TLKVQEFSNQ EEAENICQIL SSIDGISQII INEAQGFSIN FVADKEKDLL TKLKVELAFS KFEIFSLTQS QPSLDDVYLQ ATGKTLLDAE ISMAGKRDLK KESKQSMR
|
| |