| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0447 |
|---|
| Symbol | |
|---|
| ID | 3765244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 422992 |
|---|
| End bp | 423993 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637796965 |
|---|
| Product | protoheme IX farnesyltransferase |
|---|
| Protein accession | YP_396944 |
|---|
| Protein GI | 78778832 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
|---|
| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.583784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGTA GTAACTTGGA AAACTTTAAC TATAAATCTT CAATTAGGGA TGAAGTTGTT
CCTTCAAGAA AAAGATTAAC TTTGCCACCT TGGCTTGAAG TAGCAAAACC AAGATTGATT
CCACTTTTAC TTGCAACAAC TTTGGGCGGA ATGGCTTTAA CAGAGGAATG GCCTTTGTCA
TCACCAAAAC TTATCTGTAC TTTAGGTGGA GGAGCTTTGG CAGCAGCGGC AGCAGGAGCA
CTTAATTGCT TGTGGGAAAT GGAATTAGAC AAAAGGATGA TAAGAACTAG CAAAAGAGCT
TTGCCATCAG GTAAGTTATC ATCTGAGACT GTATTTTTAG CTGCAGTATC ATGTACTTTG
GCAGCTTCGA TGCTTTTAAT AAGTGGTGTA AATTATTTAG CTGCGGGACT TACACTTCTT
GGTTTATGTA GCTACGTAAT TTTATATACC GTGATTTTGA AGCCACGTAC AACTAAAAAT
ATTGTTTTTG GAGGAGTGGC TGGTGCGATA CCCCCTTTGG TCGGAGCATC TGCTGCTACA
GGACATGTAG GACTTAGTGG TTGGTGGTTG TTTGGTTTAG TAATGTTGTG GACTCCAGCT
CATTTTTGGG CACTTGCAAT TTTGTTAAAG GATGATTATG CATCTGTTGG TATTCCTATG
CTCCCTTCTG TTAAAGGATC TCTTTTTACT GCTAAAGCGA TTTCTCGTTA TGGATTGGCA
ACTGTTCTAA TGAGTATTAT GGGAGTTTTT GCTTTGCCTG AAGGCGGTCT TCTATACGGA
ATTATGTTAT TGCCATTTAA TGGAAGACTT TTGCAATTAA TAAATAAATT AAAGAAATCA
CCTGATGATC TTTTAAGAGC AAAGTCCCTT TTTAGGTGGT CAATTCTATA TATGTTTGGT
ATTTGTCTCT TATTATTAAT TTCTAGAACC CAACTATCAG TGGAATTTGA GCAGCAATCT
ATGCAAATAT TTTTCTCTAT AGGATCTCTC CTTAGTAATT AA
|
|---|
| Protein sequence | MNSSNLENFN YKSSIRDEVV PSRKRLTLPP WLEVAKPRLI PLLLATTLGG MALTEEWPLS
SPKLICTLGG GALAAAAAGA LNCLWEMELD KRMIRTSKRA LPSGKLSSET VFLAAVSCTL
AASMLLISGV NYLAAGLTLL GLCSYVILYT VILKPRTTKN IVFGGVAGAI PPLVGASAAT
GHVGLSGWWL FGLVMLWTPA HFWALAILLK DDYASVGIPM LPSVKGSLFT AKAISRYGLA
TVLMSIMGVF ALPEGGLLYG IMLLPFNGRL LQLINKLKKS PDDLLRAKSL FRWSILYMFG
ICLLLLISRT QLSVEFEQQS MQIFFSIGSL LSN
|
|---|
| |