| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0445 |
|---|
| Symbol | |
|---|
| ID | 3765242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 421003 |
|---|
| End bp | 421806 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637796963 |
|---|
| Product | putative cytochrome c oxidase, subunit 2 |
|---|
| Protein accession | YP_396942 |
|---|
| Protein GI | 78778830 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTAAATA AAAACATTTA TTTAATACTA ATTATTTCAC TCGTTTTTGC TATATCTTTT
TGGATTGGAT TTAATGTCAA TTTGCTCCCA ATTGAAGCAA GTATTAATGC ACCAATTTAC
GATGAACTTT TTAAAATTCT TTTCATCATT GGCTTAATTA TTTTTATAGG AATGACAATA
GCAGTTATTT ATAGCTTATT TAAATTTAGG AAAAGAAATG ATCAGATAGG CGATGGTATA
GCTTTAGAGG GAAACTTAAG CTTAGAAATT TTATGGACAA TTATCCCTTC AATAATTGTT
TTATTAATAG GATTATATAG CTACAACATC TACGACCGAA TGGGAGGAAT GAAGGAACTA
AACCACAATC ACGAAATGAT GCGTTCAAAT CCTGAAAAGA TATGGGCTGG AATTAGTCAA
ACTTCTGATA ATGAAATATC AAACAATAAT TTATCAATTG AAGTTTCGGC TATGCAATTT
GCGTTTCTAT TCAATTATCC CAAAGGTAAT TTTATATCAG GAGAACTACA CGTTCCTGTT
GATCAAAAAG TATCGATGAA AATGGAATCT AAAGATGTCA TTCATGCTTT CTGGGTGCCT
GAGTTCAGAA TTAAACAGGA TATTATTCCT GGTCAACCAA CTATTCTAAA TTTCACTCCT
ACAAAAGTAG GGAAATATCC GATAATTTGC GCAGAATTAT GTGGCCCATA TCATGGAGGA
ATGAGAGCCT CAATAATTGT TGAAGAAGAA TCTGATTACA ACGATTGGTT TAACAAAAAT
AAAAAAACAG AGGTAAATTT ATGA
|
|---|
| Protein sequence | MLNKNIYLIL IISLVFAISF WIGFNVNLLP IEASINAPIY DELFKILFII GLIIFIGMTI
AVIYSLFKFR KRNDQIGDGI ALEGNLSLEI LWTIIPSIIV LLIGLYSYNI YDRMGGMKEL
NHNHEMMRSN PEKIWAGISQ TSDNEISNNN LSIEVSAMQF AFLFNYPKGN FISGELHVPV
DQKVSMKMES KDVIHAFWVP EFRIKQDIIP GQPTILNFTP TKVGKYPIIC AELCGPYHGG
MRASIIVEEE SDYNDWFNKN KKTEVNL
|
|---|
| |