| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0435 |
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| Symbol | |
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| ID | 3765232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 410348 |
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| End bp | 412954 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637796953 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_396932 |
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| Protein GI | 78778820 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATCACA CACTAGTTAT TGTTGAAAGT CCCACTAAAG CAAAAACTAT AAGAAAGTTT
TTGCCTTCTA ATTATGAAGT TCTTGCTTCA ATGGGCCACG TAAGAGATCT TCCAAAAGGG
GCGGCTGAAA TCCCTGCTGC AGTTAAAAAG GAAAAATGGT CAAGGATAGG AGTAAATACA
ACAGAAGATT TTGAACCACT TTATATAGTT CCAAAAGACA AGAAAAAGGT TGTTAAAGAG
TTGAAAAATG CATTAAAAGG TGCGACCCAA CTACTATTGG CAACTGATGA AGACAGAGAG
GGAGAGAGTA TTAGCTGGCA TCTTTTGCAA ATACTTAAGC CTAAAATACC TACTAAGAGA
ATGGTTTTTC ACGAAATTAC AAAAAAGGCA ATTAATAAAG CGTTAGATCA AACTAGAGAA
ATTGACATGG AACTTGTTCA AGCTCAAGAA ACTAGAAGAA TCTTGGATAG GCTTTTTGGA
TATGAATTAT CTCCACTACT TTGGAAGAAA GTAGCTCCCA GATTATCTGC TGGTCGCGTT
CAATCAGTAT CTGTAAGACT TCTTGTTAGA AGAGAGAGAG AAAGAAGATC CTTTAAAAAA
GCTAGTTACT GGGGGATTAA AGCTTCTTTA GAGAAAGATA ATATTACTTT CGAAACTAGA
TTATTTAGTT TGAAAGGGCA AAGAATTTCC AATGGTTCAG ATTTTGATGA ACAGACTGGC
AAATTAAAAC GAGGAAATAA ATCATTGATA ATTAGAGAAG AAAAGGTAAA TGAATTGTTA
AAGGATTTTT CTTCTGAGGA TTGGTTAGTG TCAAAAATTG AAAAAAAACC ATCCATTCGT
AAGCCAGTAC CTCCATTTAC AACTAGTACA TTGCAACAAG AAGCAAACAG GAAACTTCGC
TTGTCTGCAA GAGAAACCAT GAGATGTGCA CAAGGTCTAT ATGAGAGAGG TTTCATAACA
TATATGAGAA CTGATTCAGT GCATCTTTCC GAACAAGCTA CAAGAGCTGC TAGAGAATGT
GTAAGTTCCA TGTATGGGAA AGAATACTTA TCTAATTCAC CAAGACAATT TAATTCAACT
GCAAGAAACG CTCAAGAAGC ACACGAAGCT ATTAGGCCGG CAGGTGAGGT ATTTAAAACA
CCAAAGGAAA CTAATTTAAC TGGTAGAGAC TTATCTCTTT ACGATTTAGT TTGGAAAAGA
ACTGTAGCTA GTCAAATGGC TGAAGCTAGG CTAACAATGA TTAATGCTGA AATCAGTGTA
GGGGATGGCT TATTTAAATC GAGCGGGAAA AGTATTGATT TTGCAGGATT CTTCAGAGCT
TATGTGGAGG GAAGTGATGA CCCGAGTTCA TCCCTTGAAC AACAAGAAAT AATTCTTCCA
AACTTAACAA CTGGAACATG TCTTGAAGTT ACTGATAAGG AACCTACTTT TCATGAAACT
AAACCACCTG CAAGATATAC AGAGGCTGCA TTAGTTAAAG TCCTTGAAAA AGAGGGGATT
GGAAGACCTT CTACCTATGC AAGCATTATT GGGACAATTG TGGATAGAGG TTATGCAAAT
ATATCTTCCA ATACTTTGGC TCCAACGTTT ACAGCTTTTG CCGTTACCGC TCTCTTAGAA
GAACATTTCC CTGATCTAGT TGATACTACT TTTACTGCAA AAATGGAATC TTCATTGGAT
GAAATATCCT CAGGTAATCT TGAGTGGCTA CCATACTTAG AGACTTTTTA TAAAGGTAAA
AATGGTCTGG AGGTGAAAGT TCAGAAAACA GAGGGTGACA TTGATGGTAA AGCTTATAGA
CAAGTTGATT TCGAAGACCT CCCTTGCGTA GTTAGAATAG GTTCTAACGG ACCTTGGCTT
GAGGGTATAA AAATTGATGA ATCTGGTAAT GAAATCCAGG CGAAAGGGAA TCTTCCAATG
GATATTACTC CTGGAGATTT AGATAAAAAG CAAGTTGATC AAATTTTAAG TGGCCCATCA
GATCTTGGAA CTGATCCAAA AACTGGGGAA AAAGTATTTT TAAGATTTGG ACCTTATGGA
CCTTACGTCC AATTGGGAAA TAATGATCAG GATAAAGCTA AACCAAGAAG AGCTTCATTA
CCCAAAGAGT TGAAAACTGA TGATTTAACT CTAGATGAGG CTCTAGTACT TTTAAGTTTG
CCTAGATTAC TAGGAGTTCA TCCTGAAGGA GGTATTGTTG AGGCAGATAG GGGAAGATTT
GGACCTTATA TTAAATGGAT TAAAAATGAA AATGAGTCTG AAAATAGATC ATTAAAAAAA
GAGGATGATG TTTTTACAGT TGATTTAAAA CGAGCATTAG AAATCCTTGC GATGCCAAAA
ATGGGAAGAG GTGGTCAAGA GGTACTTAAA GACTTTGGAA AACCAAAAGA ATTTAAAGAT
AAAATCCAAA TATTAAATGG AAGATATGGA GTCTATTTAA AATGTGGCAA AACTAATGTT
TCGCTTGCAA AAGATACTGA TTTAGAGAAA ATCTCAATAG ATGATGCTGT ATTGCTTCTG
GATGAAAAAC TAAAAGATAA AAAAGGATCT ATTTCAAAAA AAATAAAAAT AAGTAATAAA
AAAATTGCAA GAAAAAAGAA AAGTTAA
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| Protein sequence | MDHTLVIVES PTKAKTIRKF LPSNYEVLAS MGHVRDLPKG AAEIPAAVKK EKWSRIGVNT
TEDFEPLYIV PKDKKKVVKE LKNALKGATQ LLLATDEDRE GESISWHLLQ ILKPKIPTKR
MVFHEITKKA INKALDQTRE IDMELVQAQE TRRILDRLFG YELSPLLWKK VAPRLSAGRV
QSVSVRLLVR RERERRSFKK ASYWGIKASL EKDNITFETR LFSLKGQRIS NGSDFDEQTG
KLKRGNKSLI IREEKVNELL KDFSSEDWLV SKIEKKPSIR KPVPPFTTST LQQEANRKLR
LSARETMRCA QGLYERGFIT YMRTDSVHLS EQATRAAREC VSSMYGKEYL SNSPRQFNST
ARNAQEAHEA IRPAGEVFKT PKETNLTGRD LSLYDLVWKR TVASQMAEAR LTMINAEISV
GDGLFKSSGK SIDFAGFFRA YVEGSDDPSS SLEQQEIILP NLTTGTCLEV TDKEPTFHET
KPPARYTEAA LVKVLEKEGI GRPSTYASII GTIVDRGYAN ISSNTLAPTF TAFAVTALLE
EHFPDLVDTT FTAKMESSLD EISSGNLEWL PYLETFYKGK NGLEVKVQKT EGDIDGKAYR
QVDFEDLPCV VRIGSNGPWL EGIKIDESGN EIQAKGNLPM DITPGDLDKK QVDQILSGPS
DLGTDPKTGE KVFLRFGPYG PYVQLGNNDQ DKAKPRRASL PKELKTDDLT LDEALVLLSL
PRLLGVHPEG GIVEADRGRF GPYIKWIKNE NESENRSLKK EDDVFTVDLK RALEILAMPK
MGRGGQEVLK DFGKPKEFKD KIQILNGRYG VYLKCGKTNV SLAKDTDLEK ISIDDAVLLL
DEKLKDKKGS ISKKIKISNK KIARKKKS
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