Gene PMT9312_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0418 
Symbol 
ID3765215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp396854 
End bp397525 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content32% 
IMG OID637796936 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_396915 
Protein GI78778803 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTT TGCCAAGAAG ATTTGAGCGA ATCAAAAGTG TTTTAGATTG CAGAATGCAA 
AACTTGACTG TTTTAGTTGA GGATGTCAAT AAGCCGCATA ATCTATCAGC TATATTAAGA
ACCTGTGATG CAGCTGGAGT TTTCGAAGCA AATTTTATTA GCAAAACGAA TGCCGTTAAG
ACTTTTAATA GTACTGCGCA AGGCAGTCAG AAATGGGTCA AATTAAATAA TCATGAAAAC
ACTATTACTG CAATATCTGA TTTAAAGAAT AAGGGTTTTA AATTATATGG AACAACTCTC
AATAGTGAAT CCGTCGATTA TAGAAATTTT GATTATTCTC AAAATACATG TTTTGTTTTA
GGAGCAGAAA AATGGGGATT AAGTAAAGAA ATTATATCTA TGGTTGATCA ATCAATTTTC
ATACCTATGA GAGGTATGGT TCAATCCTTG AATGTATCAG TTGCTGCCTC CATATTATTA
TTTGAAGCTA TTCGTCAGAG AAAAAATAAA GGGAAATTGC CAACAAATGG CGAAGGTTTA
AATATGGATG AATATCGAAA GACCTTGTTT GAGTGGTGTT ACCCAGAATT AGCTACTATT
TATAAAAAAT CAGCTAAAGA ATATCCAACG TTGAATGATC AAGGAAATTT TGATCCTATT
AAAGAAAACT AA
 
Protein sequence
MSILPRRFER IKSVLDCRMQ NLTVLVEDVN KPHNLSAILR TCDAAGVFEA NFISKTNAVK 
TFNSTAQGSQ KWVKLNNHEN TITAISDLKN KGFKLYGTTL NSESVDYRNF DYSQNTCFVL
GAEKWGLSKE IISMVDQSIF IPMRGMVQSL NVSVAASILL FEAIRQRKNK GKLPTNGEGL
NMDEYRKTLF EWCYPELATI YKKSAKEYPT LNDQGNFDPI KEN