Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0418 |
Symbol | |
ID | 3765215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 396854 |
End bp | 397525 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637796936 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_396915 |
Protein GI | 78778803 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAATTT TGCCAAGAAG ATTTGAGCGA ATCAAAAGTG TTTTAGATTG CAGAATGCAA AACTTGACTG TTTTAGTTGA GGATGTCAAT AAGCCGCATA ATCTATCAGC TATATTAAGA ACCTGTGATG CAGCTGGAGT TTTCGAAGCA AATTTTATTA GCAAAACGAA TGCCGTTAAG ACTTTTAATA GTACTGCGCA AGGCAGTCAG AAATGGGTCA AATTAAATAA TCATGAAAAC ACTATTACTG CAATATCTGA TTTAAAGAAT AAGGGTTTTA AATTATATGG AACAACTCTC AATAGTGAAT CCGTCGATTA TAGAAATTTT GATTATTCTC AAAATACATG TTTTGTTTTA GGAGCAGAAA AATGGGGATT AAGTAAAGAA ATTATATCTA TGGTTGATCA ATCAATTTTC ATACCTATGA GAGGTATGGT TCAATCCTTG AATGTATCAG TTGCTGCCTC CATATTATTA TTTGAAGCTA TTCGTCAGAG AAAAAATAAA GGGAAATTGC CAACAAATGG CGAAGGTTTA AATATGGATG AATATCGAAA GACCTTGTTT GAGTGGTGTT ACCCAGAATT AGCTACTATT TATAAAAAAT CAGCTAAAGA ATATCCAACG TTGAATGATC AAGGAAATTT TGATCCTATT AAAGAAAACT AA
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Protein sequence | MSILPRRFER IKSVLDCRMQ NLTVLVEDVN KPHNLSAILR TCDAAGVFEA NFISKTNAVK TFNSTAQGSQ KWVKLNNHEN TITAISDLKN KGFKLYGTTL NSESVDYRNF DYSQNTCFVL GAEKWGLSKE IISMVDQSIF IPMRGMVQSL NVSVAASILL FEAIRQRKNK GKLPTNGEGL NMDEYRKTLF EWCYPELATI YKKSAKEYPT LNDQGNFDPI KEN
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