Gene PMT9312_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0415 
Symbol 
ID3765212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp392566 
End bp394062 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content31% 
IMG OID637796933 
Productmalate:quinone oxidoreductase 
Protein accessionYP_396912 
Protein GI78778800 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID[TIGR01320] malate:quinone-oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0309175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTTCAT CTAAAAATCC CACTAATGAC AATAGCTACT TTGATGCAGT CTTAGTAGGA 
GCAGGGATAA TGAGTAGTAC TTTAGCCCTC CTAATTTCAG AAGTTTTACC AGATATAAAA
TTTCTTATTA TAGAAAAATT AAAAGCTCCA GGAAGTGAAA GTACTGGCGC TTTTAATAAT
GCAGGTACAG GACATGCGGC TAATTGCGAA TTAAACTATA CCCCTTTAGA TGAAAAAGGA
AATCTAAAAA TAGATAAAGC GCTCTCAATA AATCGTTCTT TTGAAAGATC CATGTCTTTA
TGGGCCTCAT TGTATGAATC AGGGAAAATT GATATTAAGA AGTTTCTAAA ATTTATTCCT
CATATTAGCT TTGTGTCTGG TCAGGATAAT ATTTCTTTTT TAAAAAAAAG ATTTCAGAAA
ATGACCGATA ATCCTGAATT TATCGATATG GAATTTTCTA CATCTTTTGA TGAAATTTCA
TCATGGGCTC CTCTAATAAC AAAAGATAGA AATCCATCTA CTCAAATTGC TGCTACCAGA
ATAGGTAGAG GAACTGATAT TAATTTTGAG GCTTTAACTA AAGAGTATTT GTCATTAGTT
TCCTTAAACA AAAATGTTGA AATTAGATAC AAAACAGAAT TAGTAGATTT AAAGAAAATT
GATAAAAAAC AATGGGAACT AGAAATCAGT TCTGAAGGTA GAAAAACTTC AATTAGAACT
GGCTACGTTT TTCTTGGTGC TGGTGGAAAA ACAATTAATT ATTTACAAAA ATCAAAAATT
CCAGAAGCAA AAAGTTATGG TGGATTTCCT GTTAGTGGGA AATGGCTTAT TTGCGAGAAA
AAAGATCTAA CAGAAAAACA TAACTCAAAA GTTTATGGTA AAGCTGATAT TGGATCGCCA
CCAATGTCTG TGCCTCATTT AGATACAAGA TGGATTGATA ATAAAAAACT TCTTTTATAT
GGCCCTTTTG CTGGATTTAC AACAAAATTT CTTAAGCAAA GTTCATACTT TGACTTATTT
AGTTCAATAA AAAAGAATAA TATTTTTTCT ATGTTAGACG TTGGTTTCAA GAACAATGAT
TTAATTAATT ACCTAATATC ACAATCTTTA AAGAACCATA ACTCAAGAGT TGATAATTTA
AAGAATATGA TGCCATCAGC TAATCCCTCT GATTGGTATT TAAAAAATGC TGGGCAAAGA
GTTCAAATAA TTAAAAAAAC TGAAGGTGGT GGTTCTTTGA AATTTGGAAC GGAGATTGTG
AATTCATCTG ATGGATCACT ATCTGCTTTG TTAGGAGCAT CACCCGGAGC AAGTACTGCG
GTTTCAATTA TGGTTGAGGT TCTAGAAAAA TCTGTTTTAT TACTAAACGA CAAGCATAAT
CTTCAGAAAA AAATAAATGA CTTAATTTAT CCCGAACTAT CGGACTCTGA AAATAAAAGT
ATCTACATAA AAGACATCAA AAAAAGAAAT AATTCCATTT TTGGTTTCCA TCCATAA
 
Protein sequence
MTSSKNPTND NSYFDAVLVG AGIMSSTLAL LISEVLPDIK FLIIEKLKAP GSESTGAFNN 
AGTGHAANCE LNYTPLDEKG NLKIDKALSI NRSFERSMSL WASLYESGKI DIKKFLKFIP
HISFVSGQDN ISFLKKRFQK MTDNPEFIDM EFSTSFDEIS SWAPLITKDR NPSTQIAATR
IGRGTDINFE ALTKEYLSLV SLNKNVEIRY KTELVDLKKI DKKQWELEIS SEGRKTSIRT
GYVFLGAGGK TINYLQKSKI PEAKSYGGFP VSGKWLICEK KDLTEKHNSK VYGKADIGSP
PMSVPHLDTR WIDNKKLLLY GPFAGFTTKF LKQSSYFDLF SSIKKNNIFS MLDVGFKNND
LINYLISQSL KNHNSRVDNL KNMMPSANPS DWYLKNAGQR VQIIKKTEGG GSLKFGTEIV
NSSDGSLSAL LGASPGASTA VSIMVEVLEK SVLLLNDKHN LQKKINDLIY PELSDSENKS
IYIKDIKKRN NSIFGFHP