Gene PMT9312_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0410 
Symbol 
ID3765207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp389459 
End bp390634 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content30% 
IMG OID637796928 
Productputative L-cysteine/cystine lyase 
Protein accessionYP_396907 
Protein GI78778795 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.33409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA ATCTAAGAGA TCAAATACCA GCATTAAAAA ATAAGTATTA TTTCAACTAT 
GGTGGTCAAG GACCATTACC AAAATCTTCT CTAGAAGCAA TGGTTAAAAC TTGGGAAATT
ATCCAAGATT TAGGACCATT TACCAATGAT ATGTGGCCTT TTATTTACAA AGAAATATTG
ACCACAAAAA GAATCATTGC ACAAAAATTA GGTGTCAATT CAAAGAATGT AGCTTTAACC
GAGAATATCT CTTCCGGTAT GATTTTGCCC TTTTGGGGAA TAAAAGTAGA AGAGGGAGAG
GAGTTGTTAA TAAGTGACTG TGAACATCCT GGAGTAGTAG CTGCAAGTCG AGAATTTTGC
AGAAGAAATA AATTAATATT CAAAATTTTA CCAATCCAAA AAATTAAAAA TCTAAATGAC
GAAAATATAA TTCTAGAGAT TTTAAAAAAT CTAAATAGTC AGACTAAGAT CCTAATTATT
TCACATATTT TATGGAACTT TGGATATAAA ATTCCTTTAA AACAAATTTC TATCGAATTA
AAAAATAATC GAGAAAACTC TTATCTACTT GTTGATGGTG CTCAAACCTT TGGGCACATA
AAAATCGAAG AAGAAGTTTT TTATTCTGAT TTATATTCAA TAACTTCTCA CAAATGGGCA
TGTGGTCCAG AAGGACTTGG AGCCATTTAT GTCTCAGATA GATTTATTCA TGAAACAGAT
CCAACAATAA TTGGTTGGAA GTCATTAAAA AAAGAACAAG GAATTTATGA GCCTTCAGAT
AATCTTTTTC ATGATGATGC ACGAAAGTTT GAAGTGGCCA CCTCTTGTAT TCCTTTACTT
GCAGGGCTGC GCACTTCTTT AAATCTTTTG GATGAAGAAT ACCCTGAAAA AGAAAAAAGC
GAACATATTA AAAGGTTAAG TGAAAAACTT TGGGATGAAT TAAATCAATT AAAAGAAATT
GAATTAATTT TAGACAAAAA ATACTTAAAT GGGATAGTTA GTTTTAATAT CGAAAATCTT
GAAAATAAAT ATGAATTTGT AAAGAAACTT GGAGAAAAAA AAATTTGGAT TAGAGTTTTA
GAAGATCCAA AATGGTTTAG AGCATGTGTA CATCAAATGA CTACAGAAGC TGAGATTGAT
TTGCTTGCTA AAGAAGTAAA AAAAATATTG ACTTAA
 
Protein sequence
MKNNLRDQIP ALKNKYYFNY GGQGPLPKSS LEAMVKTWEI IQDLGPFTND MWPFIYKEIL 
TTKRIIAQKL GVNSKNVALT ENISSGMILP FWGIKVEEGE ELLISDCEHP GVVAASREFC
RRNKLIFKIL PIQKIKNLND ENIILEILKN LNSQTKILII SHILWNFGYK IPLKQISIEL
KNNRENSYLL VDGAQTFGHI KIEEEVFYSD LYSITSHKWA CGPEGLGAIY VSDRFIHETD
PTIIGWKSLK KEQGIYEPSD NLFHDDARKF EVATSCIPLL AGLRTSLNLL DEEYPEKEKS
EHIKRLSEKL WDELNQLKEI ELILDKKYLN GIVSFNIENL ENKYEFVKKL GEKKIWIRVL
EDPKWFRACV HQMTTEAEID LLAKEVKKIL T