Gene PMT9312_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0408 
SymbolmurE 
ID3765205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp387107 
End bp388642 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content30% 
IMG OID637796926 
ProductUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 
Protein accessionYP_396905 
Protein GI78778793 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.966635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATCTA TAAAATTACA TAAACTTTTA GATTTGGTAG GAATTATTCC TTCATTAGAT 
TTAATCGATC ATGAAATAAA TAATATTTCT TTTAACTCTA AAGAAGTACA AAAAGGAACT
TTATTTTTAG GTATGCCTGG TTTAAATGTT GATGGAGGAA AATATTGTAT TGAGGCAATT
GAAAATGGTG CAGAGGCTGC CATTATTGGG TCTGCTGCAA AAGAGAAAAT TGGATCTATT
GATCGAGAAA GGATTTTGGT TATAGAGGAT AATTTAGATT ATATTTTTGG TCAAATAGTC
GCTGAGTTTT GGAATAGGCC TTCAAGAAAA CTTAAACTTA TTGGTGTTAC GGGTACAAAT
GGAAAAACGA CAATTACTTT TTTATTGGAA TATCTTTTAA AAAAATTAGG GAAAAAGACT
GCATTATTTG GGACCTTGCT CAATAGATGG CCTGGCTTTT CAGAAGTGGC TCTTCATACA
ACTGATTTCG CCGATAAACT CCAAAAGAAA TTAAATGCTG CTGTTGAGGC AGAATCTGAA
TTCGCGATAT TAGAGGTAAG TTCTCATTCT ATTGCTCAAA ACAGGATATC AGGATGCGAA
TTTGAGGCGG CTATTTTTAC TAATTTAACT CAAGATCATC TTGATTATCA CTCAGATATG
GAATCATATT TTCAAACAAA AAGAAAATTA TTTTTCCCAC CTTACTTAAA TGAAAAAGAT
GGCATTTGTG TATTAAATCA TGATGACCAT TGGATATCTA AATTATCATC TGATCTTGAA
AAAAGATCTT TATTAGTCTC TACAAAGATT ACTGAAAGTG AATTTGAAAG TGATGATTTT
TTTTTCGTAA CAGATAAGAA ATTTACTGAA ATTGGTTCCA CCTGTATTTT TCATACACCT
AGGGAAAAAA TTCAACTTTT TGTTCCACTT GTCGGTGAAT TTAATTTAAT GAATGCGATT
CAAGCAATAA CAATTTTGTA TAAACTTAAT TTTTCTTTAA AAGATCTATC AAAATTAATA
CAATCTTTCC CTGGTGCTCC TGGGAGAATG GAGAAAATAC AAATTGATAA TAATGACGTT
TCAAGATCTC TTCCAACAGT AATTGTTGAT TATGCCCACA CTCCTGATGG ATTAAAAAAA
GTTTTGCAAT CAATTAAAAA ACTTTGTGAA GGGAAACTCA TAACTGTTTT TGGCTGTGGC
GGAGATCGTG ATCGTAGTAA AAGGCCTTTA ATGGGATCAA TAGCTGAAGA GTTTTCTGAT
CAACTTTTTA TAACTTCAGA TAATCCAAGA TCAGAAGAAC CCCAAAAGAT AGTAAATGAT
ATTTTGATGG GCATAAAAAA AAGAGAAAAA ATAACAATTG AAATTGATAG ATTTAAAGCA
ATAAATGAAT CTATTAAATT TGCTAAAAAA AAAGATATTG TTTTAATTGC AGGAAAAGGA
CATGAAGACT ACCAAATTCT CAATGATAAA GTTATTAATT TTGATGATAG AAAAATAGCT
TATAAATTAT TAAAAGAAAA AAATAAATCT CAATAA
 
Protein sequence
MRSIKLHKLL DLVGIIPSLD LIDHEINNIS FNSKEVQKGT LFLGMPGLNV DGGKYCIEAI 
ENGAEAAIIG SAAKEKIGSI DRERILVIED NLDYIFGQIV AEFWNRPSRK LKLIGVTGTN
GKTTITFLLE YLLKKLGKKT ALFGTLLNRW PGFSEVALHT TDFADKLQKK LNAAVEAESE
FAILEVSSHS IAQNRISGCE FEAAIFTNLT QDHLDYHSDM ESYFQTKRKL FFPPYLNEKD
GICVLNHDDH WISKLSSDLE KRSLLVSTKI TESEFESDDF FFVTDKKFTE IGSTCIFHTP
REKIQLFVPL VGEFNLMNAI QAITILYKLN FSLKDLSKLI QSFPGAPGRM EKIQIDNNDV
SRSLPTVIVD YAHTPDGLKK VLQSIKKLCE GKLITVFGCG GDRDRSKRPL MGSIAEEFSD
QLFITSDNPR SEEPQKIVND ILMGIKKREK ITIEIDRFKA INESIKFAKK KDIVLIAGKG
HEDYQILNDK VINFDDRKIA YKLLKEKNKS Q