Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0394 |
Symbol | |
ID | 3765191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 374161 |
End bp | 374946 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637796912 |
Product | putative recombination protein O |
Protein accession | YP_396891 |
Protein GI | 78778779 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.023387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGGTT CTGGTGAGTG CAGATTAAAG GGTCTCTGTA TTAAAGCTTC TCCGCTAGGC GAGAATGATA GATTAATTAC TATCCTCACA GATGAGCGGG GGATTGTGCG ATTAGCAGTA CCTGGTGCTA GACGTCCAAA AAGTAGTCTT GCAGCAGCCA CTCCCTTAAA TTATTTAAGT TTGCAGATTT TTGGAAAAAG AAATCTTAAA TCTGTACGGC AAATTAAAAT ATTAAAAAGC TATGCCGGTC TAGGGAAAAA TATTGAATGT CTTGCAGCCG CGCAAGCAAT AACAGAATTA ACATTTTTAT TAGTTGGTAA TGATGACGAG CAACAAAACT ATTTATCTTG TGTTCTTGCT CATTTAGATA GGATTTATTT ATATGAAGTT TCTAAAGAAG AGGATATTAA AATGCTCTGT ATTAGTATTC AATCTTTAAT CCATCTATTA GCCATCGGAG GAATTAATTT ACCAATTCAT CATTGCTGTA AAACTGGAGA ACCAATAATT CCTCCTTTAG GAAATTGGGA ATGGAATTGT TATTATTTGC CAAATGAAGG TTTTTCATCA ATAGAAGATC CTCAAAGTAA TCTAAAAATA AATGCATCTG AGGTTGCTTT ATTACAAAGA CTTCTTTTCC CCGAATTACC AATAAAATCT AATGGAGAGT TATTGGGACC TAAAAAAGTC TGGCTTAAAA TATTATTTAT TATTGAGACT TGGATCTCTA CTCAATTAGA GAAGGATCTA TCTTCACTAA AAATGTTGAG GGAAATATAT AGTTAG
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Protein sequence | MSGSGECRLK GLCIKASPLG ENDRLITILT DERGIVRLAV PGARRPKSSL AAATPLNYLS LQIFGKRNLK SVRQIKILKS YAGLGKNIEC LAAAQAITEL TFLLVGNDDE QQNYLSCVLA HLDRIYLYEV SKEEDIKMLC ISIQSLIHLL AIGGINLPIH HCCKTGEPII PPLGNWEWNC YYLPNEGFSS IEDPQSNLKI NASEVALLQR LLFPELPIKS NGELLGPKKV WLKILFIIET WISTQLEKDL SSLKMLREIY S
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