Gene PMT9312_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0394 
Symbol 
ID3765191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp374161 
End bp374946 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content34% 
IMG OID637796912 
Productputative recombination protein O 
Protein accessionYP_396891 
Protein GI78778779 
COG category[L] Replication, recombination and repair 
COG ID[COG1381] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00613] DNA repair protein RecO 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.023387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGTT CTGGTGAGTG CAGATTAAAG GGTCTCTGTA TTAAAGCTTC TCCGCTAGGC 
GAGAATGATA GATTAATTAC TATCCTCACA GATGAGCGGG GGATTGTGCG ATTAGCAGTA
CCTGGTGCTA GACGTCCAAA AAGTAGTCTT GCAGCAGCCA CTCCCTTAAA TTATTTAAGT
TTGCAGATTT TTGGAAAAAG AAATCTTAAA TCTGTACGGC AAATTAAAAT ATTAAAAAGC
TATGCCGGTC TAGGGAAAAA TATTGAATGT CTTGCAGCCG CGCAAGCAAT AACAGAATTA
ACATTTTTAT TAGTTGGTAA TGATGACGAG CAACAAAACT ATTTATCTTG TGTTCTTGCT
CATTTAGATA GGATTTATTT ATATGAAGTT TCTAAAGAAG AGGATATTAA AATGCTCTGT
ATTAGTATTC AATCTTTAAT CCATCTATTA GCCATCGGAG GAATTAATTT ACCAATTCAT
CATTGCTGTA AAACTGGAGA ACCAATAATT CCTCCTTTAG GAAATTGGGA ATGGAATTGT
TATTATTTGC CAAATGAAGG TTTTTCATCA ATAGAAGATC CTCAAAGTAA TCTAAAAATA
AATGCATCTG AGGTTGCTTT ATTACAAAGA CTTCTTTTCC CCGAATTACC AATAAAATCT
AATGGAGAGT TATTGGGACC TAAAAAAGTC TGGCTTAAAA TATTATTTAT TATTGAGACT
TGGATCTCTA CTCAATTAGA GAAGGATCTA TCTTCACTAA AAATGTTGAG GGAAATATAT
AGTTAG
 
Protein sequence
MSGSGECRLK GLCIKASPLG ENDRLITILT DERGIVRLAV PGARRPKSSL AAATPLNYLS 
LQIFGKRNLK SVRQIKILKS YAGLGKNIEC LAAAQAITEL TFLLVGNDDE QQNYLSCVLA
HLDRIYLYEV SKEEDIKMLC ISIQSLIHLL AIGGINLPIH HCCKTGEPII PPLGNWEWNC
YYLPNEGFSS IEDPQSNLKI NASEVALLQR LLFPELPIKS NGELLGPKKV WLKILFIIET
WISTQLEKDL SSLKMLREIY S