Gene PMT9312_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0393 
Symbol 
ID3765190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp372910 
End bp374076 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content32% 
IMG OID637796911 
Productputative glycosyl transferase, group 1 
Protein accessionYP_396890 
Protein GI78778778 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.336091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTCATA TTGCCTGGCT GGGTAAAAAA TCGCCTTTTT GCGGAAATGT AACTTATGGT 
AATTCAACTA CTAAGGAATT GAAGGCCAGA GGACATAAAA TTAGTTTCAT CCATTTCGAC
AATCCTTCTA ATTCAAATTC ATCAAAACCA TTATTTCTTG CAAATGATCC TGATGTAAGC
CTTCCATATT TAATTAAGTC TCAAATTTAT ACAATACCTT CGCCAAGAGC AGAAAAAGAG
CTAAGGCTAT CATTGGAAAG ATTAAAACCT GACATAGTAC ATGCAAGCCT AACTTTATCT
CCTTTAGACT TTAGACTTCC AGAACTTTGT AATGAAATTA ATGTTCCACT TATAGGTACA
TTTCATCCAC CATTTGATGC AAAAAATAGA AATTTAACTG CAAGTACTCA ACAATTAACT
TATCAACTTT ATGCTCCCTC TTTAGCAAAG TTCGATAAAA TAATCATTTT TTCTGAAACT
CAAAGAAATG TTCTTGAGAA ATTAGGAGTA CCTAAAGAAA AACAAATAAT TATTCCAAAC
GGAGTTGATG AAAATATTTG GAAACCTTTT TGCGAAAAAA GCAAAAAATT TGATCAGGTA
AAAAATAAAC TAGGAAATGA AAGAATCTTT TTATATATGG GAAGGATTGC CAATGAGAAA
AATATCCAAG CACTTTTACG TTCTTGGCGC CAAACAAAAA AGAAAAATTG TAAATTAGTT
ATTGTTGGAG ATGGACCAAT GAAGCCAACA CTTGAAAATA GTTTTTCTAA CCTAAGTAAA
AAGAAATTAA TTTGGTGGGG TGCCGAAATA GATTTAGAAA CAAGAGTAGC GATAATGCAA
ATAGCAGAAG TATTTTTCTT ACCAAGCCTA GTAGAAGGTT TGTCATTATC ACTTTTAGAG
GCAATGTCTT CTGGCACTGC ATGTATAGCC ACAGATGCTG GGGCTGATGG TGAAGTTTTA
GATAATGGAG CAGGAATAGT GATTTCAACA GATAATGTTG CTGCTCAACT AAAAACTATT
ATCCCTATTC TGGTTGAACA TCCTTCATTT ACAAAAAATC TTGGGAAAAA AGCTAGAGAA
CGAATAATTG AAAGATATAC AATTACTAAA AATATAAATT CTCTTGAGAA AGTTTATATA
AAATTAAAAG ATAATTTCAA AACCTAA
 
Protein sequence
MVHIAWLGKK SPFCGNVTYG NSTTKELKAR GHKISFIHFD NPSNSNSSKP LFLANDPDVS 
LPYLIKSQIY TIPSPRAEKE LRLSLERLKP DIVHASLTLS PLDFRLPELC NEINVPLIGT
FHPPFDAKNR NLTASTQQLT YQLYAPSLAK FDKIIIFSET QRNVLEKLGV PKEKQIIIPN
GVDENIWKPF CEKSKKFDQV KNKLGNERIF LYMGRIANEK NIQALLRSWR QTKKKNCKLV
IVGDGPMKPT LENSFSNLSK KKLIWWGAEI DLETRVAIMQ IAEVFFLPSL VEGLSLSLLE
AMSSGTACIA TDAGADGEVL DNGAGIVIST DNVAAQLKTI IPILVEHPSF TKNLGKKARE
RIIERYTITK NINSLEKVYI KLKDNFKT