Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0334 |
Symbol | |
ID | 3765129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 322684 |
End bp | 323565 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637796850 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_396831 |
Protein GI | 78778719 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCCTGAAT TACCTGAAGT AGAGACTGTT CGCAGAGGTT TAGAGCAAAA ACTTAATAAC TTTATTATTA AAAAAGTTGA AGTCTGTAGG AATTCAACTG TGGCTTTCCC TACTGAAAAA GAAGAATTTA TTAAGGGACT ACAAAACTCA CTTTTATACA AATGGGATAG AAGAGGAAAA TATTTAATAG CTGAACTAAA AAAAATTGAA AATGAAAATA TTAAATTTCC TCTTAAAAAA TTGAGGCAAA ATAATGGATT TCTTGTAGTT CATTTAAGAA TGACGGGATA TTTCAAATTT ATTGATAACT CTACTCAGCC TTGTAAACAT ACAAGAATAA GAGTTTTCGA TAAAAAAAAT AATGAGCTCA GGTACATTGA CGTAAGAAGT TTTGGTCAAA TGTGGTGGAT TAAGGAAGGG TTATCGCCTA ATAAAATAAT CAAAGGATTA GGTTCATTAG GACCAGAACC ATTCTCCAAG AACTTTGATG AAAAATACCT TAAGAAAGTT ATTTCCAAAA GAAAAAAATC TATAAAAGCC ATCTTATTAG ATCAAACAAT AGTGGCAGGT ATAGGTAATA TTTATGCCGA TGAAAGTTTG TATTCGGCTG GCATCTCACC TTTTAGGGCG GCTAAAACAA TAAAGAAAAA TGAATTAATT AATCTCAAAG AATCAATTGT TAATGTATTA AAAAAAAGTA TAGGTTCGGG GGGGACAACC TTTAGTGATT TTAGAGACTT GGAAGGGGAG AATGGAAATT TTGGTTTACA AACAAATGTC TATAGAAGAA CTGGTAAAGA ATGTCGCAAA TGTGGGAATT TAATTGAAAA GCAAAAAATT GCTGGACGAA GTACTCATTG GTGTCCAAAT TGCCAAAAGT AA
|
Protein sequence | MPELPEVETV RRGLEQKLNN FIIKKVEVCR NSTVAFPTEK EEFIKGLQNS LLYKWDRRGK YLIAELKKIE NENIKFPLKK LRQNNGFLVV HLRMTGYFKF IDNSTQPCKH TRIRVFDKKN NELRYIDVRS FGQMWWIKEG LSPNKIIKGL GSLGPEPFSK NFDEKYLKKV ISKRKKSIKA ILLDQTIVAG IGNIYADESL YSAGISPFRA AKTIKKNELI NLKESIVNVL KKSIGSGGTT FSDFRDLEGE NGNFGLQTNV YRRTGKECRK CGNLIEKQKI AGRSTHWCPN CQK
|
| |