Gene PMT9312_0319 details

Gene Information

• Locus tag: PMT9312_0319
• Symbol: nrdR
• ID: 3765108
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: -
• Start bp: 304868
• End bp: 305347
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 637796829
• Product: transcriptional regulator NrdR
• Protein accession: YP_396816
• Protein GI: 78778704
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGTGTC CAACCTGTCA AAATACAGAT AGCAGAGTTT TGGAATCAAG ATCTGCTGAT 
AGTGGGAAAA GTGTTCGAAG AAGAAGAGAG TGCCTAAATT GCAGCTTTAG ATTTACCACT 
TATGAAAGAG TTGAAACAAT GCCAGTTTCA GTTATTAAAA AAGATGGGAA CAGTGAATTA 
TTTGATAAAC AAAAATTATT TACTGGTATA TCAAGAGCCT GCGAAAAGAC TACCTTCACC 
AGTGAAGCAA TTATTAATTT TGTAGATGGA ATAGAATCAC AAATTTTACA AGATTCTAAT 
AAGGATATTA AATCTTCACA AATTGGAGAA TTAATACTTA AAAGTCTTAG GAAAGAAAAC 
GAAGTTGCAT ATATAAGATA TGCTTCAGTT TATAGAAAAT TCAATGGAGT AAAAGATTTT 
ATCTCTACTC TTGAATCCCT CAAAGGAGCT TCAAAAAATC AATTAGCTTC AATTTTATAA 

 

Protein sequence

MQCPTCQNTD SRVLESRSAD SGKSVRRRRE CLNCSFRFTT YERVETMPVS VIKKDGNSEL 
FDKQKLFTGI SRACEKTTFT SEAIINFVDG IESQILQDSN KDIKSSQIGE LILKSLRKEN 
EVAYIRYASV YRKFNGVKDF ISTLESLKGA SKNQLASIL