Gene PMT9312_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0295 
Symbol 
ID3765083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp283490 
End bp284224 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content36% 
IMG OID637796804 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_396792 
Protein GI78778680 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACCCAC AATTATCCCC AAAAGCTATA AGGGAAATCA GAGAAGGAAC TTGCAATCCC 
CTTGGTGCAC CACAAGTAAC TACAGATTTA AGTGAAAATA TAATCCTAAC AAGCTTAGAT
GATCTTCATA ATTGGGCTAG ATTAAGTAGT CTTTGGCCTC TTCTATACGG AACAGCTTGT
TGTTTTATTG AATTTGCTGC ACTAATTGGT TCTAGATTTG ATTTTGACAG GTTTGGATTA
GTACCGAGAA GCTCTCCAAG ACAAGCAGAT CTATTAATAG TCGCAGGGAC AGTAACGATG
AAAATGGCTC CAGCCCTAGT AAGACTTTAT GAGCAGATGC CTGAGCCAAA ATATGTTATT
GCAATGGGTG CTTGTACAAT CACAGGTGGA ATGTTTAGCG CAGATTCTAC TACTGCTGTC
AGAGGCGTTG ATAAATTAAT ACCAGTCGAT TTATATCTTC CAGGATGTCC ACCAAGACCA
GAAGCAATTT TTGATGCTGT AATAAAATTA AGAAAAAAAG TAGGTAATGA ATCAATTTTA
GAGCGGGAAA AAACAGAGCA AACCCACAGG TACATAACAT ATAAACACGA AATGAATCTT
GTTTTCTCTC AAAATACTGG TGAATATTTA AACAAAACTT CAACGAATGT TTTTCCTTCC
TCCAAAAAAG AAAAAATAAC TGAATTACCT GAAAACAGGG AACAAACCGA AATTATTAAT
AGTGAAGAAG AGTAA
 
Protein sequence
MNPQLSPKAI REIREGTCNP LGAPQVTTDL SENIILTSLD DLHNWARLSS LWPLLYGTAC 
CFIEFAALIG SRFDFDRFGL VPRSSPRQAD LLIVAGTVTM KMAPALVRLY EQMPEPKYVI
AMGACTITGG MFSADSTTAV RGVDKLIPVD LYLPGCPPRP EAIFDAVIKL RKKVGNESIL
EREKTEQTHR YITYKHEMNL VFSQNTGEYL NKTSTNVFPS SKKEKITELP ENREQTEIIN
SEEE