Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0295 |
Symbol | |
ID | 3765083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 283490 |
End bp | 284224 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637796804 |
Product | NADH dehydrogenase subunit B |
Protein accession | YP_396792 |
Protein GI | 78778680 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAACCCAC AATTATCCCC AAAAGCTATA AGGGAAATCA GAGAAGGAAC TTGCAATCCC CTTGGTGCAC CACAAGTAAC TACAGATTTA AGTGAAAATA TAATCCTAAC AAGCTTAGAT GATCTTCATA ATTGGGCTAG ATTAAGTAGT CTTTGGCCTC TTCTATACGG AACAGCTTGT TGTTTTATTG AATTTGCTGC ACTAATTGGT TCTAGATTTG ATTTTGACAG GTTTGGATTA GTACCGAGAA GCTCTCCAAG ACAAGCAGAT CTATTAATAG TCGCAGGGAC AGTAACGATG AAAATGGCTC CAGCCCTAGT AAGACTTTAT GAGCAGATGC CTGAGCCAAA ATATGTTATT GCAATGGGTG CTTGTACAAT CACAGGTGGA ATGTTTAGCG CAGATTCTAC TACTGCTGTC AGAGGCGTTG ATAAATTAAT ACCAGTCGAT TTATATCTTC CAGGATGTCC ACCAAGACCA GAAGCAATTT TTGATGCTGT AATAAAATTA AGAAAAAAAG TAGGTAATGA ATCAATTTTA GAGCGGGAAA AAACAGAGCA AACCCACAGG TACATAACAT ATAAACACGA AATGAATCTT GTTTTCTCTC AAAATACTGG TGAATATTTA AACAAAACTT CAACGAATGT TTTTCCTTCC TCCAAAAAAG AAAAAATAAC TGAATTACCT GAAAACAGGG AACAAACCGA AATTATTAAT AGTGAAGAAG AGTAA
|
Protein sequence | MNPQLSPKAI REIREGTCNP LGAPQVTTDL SENIILTSLD DLHNWARLSS LWPLLYGTAC CFIEFAALIG SRFDFDRFGL VPRSSPRQAD LLIVAGTVTM KMAPALVRLY EQMPEPKYVI AMGACTITGG MFSADSTTAV RGVDKLIPVD LYLPGCPPRP EAIFDAVIKL RKKVGNESIL EREKTEQTHR YITYKHEMNL VFSQNTGEYL NKTSTNVFPS SKKEKITELP ENREQTEIIN SEEE
|
| |