| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0288 |
|---|
| Symbol | |
|---|
| ID | 3765076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 276394 |
|---|
| End bp | 276957 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637796797 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_396785 |
|---|
| Protein GI | 78778673 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.919876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAATA AAAACTTTAT AAAAAAATCC ATTTTTAAAG AAAAAATATC TGAGTTAAAA
TCTAAAAAAT TTAGTTTCGA AATAAATAGA ATTGAGCTTC CAAATGGACA TGAAGCTGAA
TATGGATACA TTAAGCATCC TGGCGCTGCC CTAGCAGTGC CTATTACAAA AGACAATAAA
GTTATCATTC TCCGGCAATA TAGATTTGCT GTTTCGAGGT ATTTATTAGA ATTTCCAGCA
GGTACATTAG AAATAGGCGA AACACCTATT AATTCAATTA AAAGAGAAAT ACAAGAAGAG
ACTGGATTTA GTGCAAACAA ATGGGATGAA CTAGGAACTC TTGTCCCCGC TCCTGGTTAT
GCAGATGAAG AAATTTATTT ATTTTTAGCG CGTCAATTGA GCAAACTAAA TTCAGAGGTT
AAAGGAGATT TAGATGAAGA TATAGAAGTA TTAATTTTAG ATCCCGACGA ACTTGATAAT
CTTATTTCTA GTGGGGATGA AATTCTTGAC GCAAAAACTG TGACAGCTTG GTTTAGAGCT
AAACAATTTT TAGATAAATT ATGA
|
|---|
| Protein sequence | MGNKNFIKKS IFKEKISELK SKKFSFEINR IELPNGHEAE YGYIKHPGAA LAVPITKDNK
VIILRQYRFA VSRYLLEFPA GTLEIGETPI NSIKREIQEE TGFSANKWDE LGTLVPAPGY
ADEEIYLFLA RQLSKLNSEV KGDLDEDIEV LILDPDELDN LISSGDEILD AKTVTAWFRA
KQFLDKL
|
|---|
| |