| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0231 |
|---|
| Symbol | |
|---|
| ID | 3765016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 224709 |
|---|
| End bp | 225965 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637796738 |
|---|
| Product | phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase |
|---|
| Protein accession | YP_396729 |
|---|
| Protein GI | 78778617 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
|---|
| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.530099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTA AAAGTACAGA CTCCAAAATA AAGGTTCTTT TATTAATAAC GGGGAGTATT
GCAGCTGTAA GAATTCCATT ATTAGTTAGC CAATTAGCAA AAGAAAATTA TGAAATAAGG
TGCGTTTTAT CTAAAAATGC AGAAAAATTA ATAAAACCGC TTTCTCTTTC TATCTTAAGT
AGAAACCCTT GCATTTTAGA AAATGATCAA TGGTTAAATA GTCAATCAAC ACCTCTTCAT
ATAGAACTAA CCAAATGGGC TGATATTTTA ATCATTGCCC CTTTAACAGC TACAACATTA
TCAAAATGGG TAACTGGAAA TGCAGAAGGA TTGATTCCAA GCATATTAAT TGCAAATATT
AAGCCAATTG TTGTTGCACC AGCAATGAAT ACACAAATGT GGCTAAATAA AGCTGTCCAA
GAAAATTATG AGAATTTACA GAATTACGAA AATGTTTTGT CTTTGCATCC AAGTGAAGGT
CTCTTAGCAT GCGATGCTAT TGGCATAGGT AAGATACCTC CAAATGATCT AATTCAATTA
GCTCTTGAAT TTATAACTTC ACATAATCAA AATATTTATC GCAAAGATTT ACTAAACAAA
GAAATTTTAA TAACTGGAGG TTGTACCTCA GAAAAAATTG ACGCAGCAAG AAATATTACT
AACAAAAGTT CTGGAGCTAT GGGCTTACTT CTTTCTCAAG TAGCAAGGTT CAGAGGAGCA
CAAGTAAAAT ATATCCATGG GCCTCTGAAA ATTGATAAAG ATCTTACTGA TGGAATAAAA
AGATATGAAA TCGAGACAAG TGTTGATTTA ATTAGGTCAC TTCAAAATGA AATTTCAAAT
TGTGATTATT TTTTCATGAA TGCAGCAGTA TCTGATTTCA AGATAACCTC TGATACTTCT
GCTAAAATTC CCAAACATAA AATTAATGAT CATTTGAATA AAAATTTTGA GCTAGTGCCA
GATATTTTAA AAACAATAAG TGAATCAAAA AAAGATAACC AAGTTTTTGT AGGCTTTTGC
GCTTTTACAG GATCTATTGG AGAAGCAAGA ACAATAATTA AAAAAAAGAT TATTCAAAAA
GGTTGCGATT ATCTATTCGC AAATCCAATT GATCTTGAAG GGCAAGGATT TGGCTTTTTG
GCGCAAAATG AAGGTTGGCT ATTCGATACA AAAAATATGG AACATCATAT ACATAAAACA
TCAAAAATTG ATTTAGCAAA TAAATTAATC ACTCAAATTA TTTCAGTAAA AAATTAA
|
|---|
| Protein sequence | MKTKSTDSKI KVLLLITGSI AAVRIPLLVS QLAKENYEIR CVLSKNAEKL IKPLSLSILS
RNPCILENDQ WLNSQSTPLH IELTKWADIL IIAPLTATTL SKWVTGNAEG LIPSILIANI
KPIVVAPAMN TQMWLNKAVQ ENYENLQNYE NVLSLHPSEG LLACDAIGIG KIPPNDLIQL
ALEFITSHNQ NIYRKDLLNK EILITGGCTS EKIDAARNIT NKSSGAMGLL LSQVARFRGA
QVKYIHGPLK IDKDLTDGIK RYEIETSVDL IRSLQNEISN CDYFFMNAAV SDFKITSDTS
AKIPKHKIND HLNKNFELVP DILKTISESK KDNQVFVGFC AFTGSIGEAR TIIKKKIIQK
GCDYLFANPI DLEGQGFGFL AQNEGWLFDT KNMEHHIHKT SKIDLANKLI TQIISVKN
|
|---|
| |