| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0226 |
|---|
| Symbol | |
|---|
| ID | 3765011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 218769 |
|---|
| End bp | 219866 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637796733 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_396724 |
|---|
| Protein GI | 78778612 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGTA GTTTTGGAAA AATTTTTCGG GTTAGTACTT TTGGAGAATC ACATGGCGGT
GGAGTAGGAG TTATCCTTGA TGGATGTCCA CCTAAGTTAA AAATAGATAT AAAACTGATA
CAAAATGAAT TAGATAGGCG TAGACCTGGT CAAAGTGACA TTACAACACC ACGAAATGAA
GACGATAAAA TTGAGATATT AAGTGGGATA AAGGAAGGTT TAACACTTGG AACTCCAATA
GCGATGTTGG TAAGAAACAA GGATCAAAGA CCAGGAGATT ATAATAATTT GGAGCAAGTA
TTTAGACCAT CTCATGCAGA TGGTACATAT CATCTGAAAT ATGGAATTCA GGCTGGTTCT
GGAGGTGGAA GAGCGTCTGC AAGAGAAACA ATTGGGCGAG TAGCAGCTGG TGCTGTAGCA
AAACAATTAT TAAAAAACTT GTGTAACACT GAAATATTAT CTTGGGTAAA GCGTATACAT
GATATTGATT CTGATGTAAA TAAAGAGAAG ATTTCTCTCA ATAAAATAGA TTCTAATATT
GTCAGATGTC CTGATGAAAA GGTATCAGCA GAAATGATCG ATAGAATTAA GGATTTAAAG
CGTCAAGGAG ACTCTTGTGG AGGTGTAATT GAATGTCTGG TAAGGAATGT TCCGTCTGGT
CTTGGGATGC CTGTTTTTGA TAAATTGGAA GCTGATTTAG CGAAGGCTTT GATGTCTTTG
CCAGCCACGA AAGGCTTTGA AATAGGTTCA GGTTTCTCTG GAACTTATTT AAAAGGAAGC
GAACATAATG ATTCATTCAT TAAGTCTGAT GATATTAGTA AGTTAAGAAC AACATCTAAC
AATTCAGGAG GTATACAGGG CGGAATAAGT AATGGAGAAA ATATTGAGAT GAAGATAGCT
TTTAAACCCA CAGCAACCAT TGGGAAAGAA CAGAAAACCG TAAATGCTGA AGGGAAAGAA
GTATTGATGA AAGCAAAAGG GAGACATGAT CCATGCGTTC TACCAAGAGC AGTTCCTATG
GTTGACGCTA TGGTCGCTTT AGTACTTGCT GATCATTTGC TTCTGAATAA TGCTCAATGT
GGATTAATGA AAAATTAG
|
|---|
| Protein sequence | MSSSFGKIFR VSTFGESHGG GVGVILDGCP PKLKIDIKLI QNELDRRRPG QSDITTPRNE
DDKIEILSGI KEGLTLGTPI AMLVRNKDQR PGDYNNLEQV FRPSHADGTY HLKYGIQAGS
GGGRASARET IGRVAAGAVA KQLLKNLCNT EILSWVKRIH DIDSDVNKEK ISLNKIDSNI
VRCPDEKVSA EMIDRIKDLK RQGDSCGGVI ECLVRNVPSG LGMPVFDKLE ADLAKALMSL
PATKGFEIGS GFSGTYLKGS EHNDSFIKSD DISKLRTTSN NSGGIQGGIS NGENIEMKIA
FKPTATIGKE QKTVNAEGKE VLMKAKGRHD PCVLPRAVPM VDAMVALVLA DHLLLNNAQC
GLMKN
|
|---|
| |