| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0205 |
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| Symbol | rplA |
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| ID | 3764990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 196756 |
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| End bp | 197463 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637796712 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_396703 |
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| Protein GI | 78778591 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TATCAAAAAG AATGGCGGCT CTATCAACAA AGATAGAAGA TCGCATTTAC
CCTCCACTTG AAGCTCTTAG TATTATCAAG GAAAATGCCA ACGCTAAATT TGATGAAACT
ATTGAAGCGC ATATACGTTT AGGTATTGAT CCAAAATATA CTGATCAACA ATTAAGGACC
ACAGTCGCTT TACCACATGG TACTGGCCAA AGTATCAAAA TCGCAGTAAT CACAAGCGGA
GAGAATGTAT CTAAAGCCAA GTCTGCTGGT GCCGATTTAT TTGGAGAAGA AGATCTTGTG
GAAAGCATCA ACAAAGGAAA TATGGACTTT GATCTACTTA TTGCAACCCC AGATATGATG
CCAAAGGTTG CAAAATTAGG ACGAGTTTTA GGACCTAGAG GTTTAATGCC TAATCCTAAA
GCTGGTACAG TAACTAATGA TATTGCTAAT GCAATAAAAG AATTCAAAGC TGGTAAGCTC
GAATTTAGAG CAGATAAAGC AGGTATCGTT CATGTCCGCT TTGGAAAAGC AAGTTTTACA
AAAGAGGCGC TATTTGACAA TTTAAAAACC TTACAAGAAT CAATTGATAA AAACAAACCA
AGTGGCTCTA AAGGAAAGTA TTGGAAAAGT TTTTATGTAA CTTCAACTAT GGGACCTTCC
GTTCAAGTAG ATATAAGTGC CGTACAAGAT TACCAACCTG AAGGTTAA
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| Protein sequence | MKKLSKRMAA LSTKIEDRIY PPLEALSIIK ENANAKFDET IEAHIRLGID PKYTDQQLRT
TVALPHGTGQ SIKIAVITSG ENVSKAKSAG ADLFGEEDLV ESINKGNMDF DLLIATPDMM
PKVAKLGRVL GPRGLMPNPK AGTVTNDIAN AIKEFKAGKL EFRADKAGIV HVRFGKASFT
KEALFDNLKT LQESIDKNKP SGSKGKYWKS FYVTSTMGPS VQVDISAVQD YQPEG
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