| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0196 |
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| Symbol | rbgA |
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| ID | 3764981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 188396 |
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| End bp | 189268 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637796703 |
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| Product | ribosomal biogenesis GTPase |
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| Protein accession | YP_396694 |
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| Protein GI | 78778582 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1161] Predicted GTPases |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.122374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGACATAC CCAAAATTCA ATGGTACCCA GGCCATATCG CAAAAGCAGA AAAGAAATTA
TCTGAAATTA TCAATAAAGT AGATTTAGTT ATAGAAGTTA GAGATGCACG AATTCCTTTG
TCAACAGGAC ATCCACACTT AAATAAATGG ATAAATAATA AAAAACATAT TCTTGTTATT
AACAGATCAG ACATGATCTC CCATAATACA ATCAATAGTT GGAATAATTG GTTTAATGCT
AAAGATCAAT ATCCTCTTTG GTGTGATGCT AAAAGAGGAA TAGGTATTAA AGAAATTTGT
AAGTCAGCCA AAGATTCTAG GTCGTCAATC GACGATAGAA GACTCTCTAG AGGAATGCGA
ATTAGGCCAA TTAGAGCCCT TACACTTGGT TTTCCAAACG TAGGAAAGTC AGCATTAATT
AATAGAATTG CAAAAAAAAG AGTTGTAGAT AGCGCTAGGA AAGCAGGCGT GACTCGTAAT
TTAAGATGGA TAAAATTAGA CAGTGGTATA GATCTGCTAG ATGCTCCTGG AGTTATACCT
CCAAATTTAG AAGATCAAAA ATCAGCACTT AATCTTGCAC TATGTGACGA TATTGGTGAA
GCTGCTTATG AAATAGAGAG TGTCGCAATT GAATTTATCA AAATTATATC CACTCTCAAC
AAAGATAAGA ATGCGAATAT TTCAGTTAAA AAAATATCGA ATAGATATGG AGTTGATATT
ACAAAAGGCT TTAAGAGTCC TTCTGCTTGG ATCGACGAAG CAGCTTCAAA ACATACCTCA
GGCGATAAAA GGAGAATGTC TCATAAGTTA TTAGAAGATT ATAGAAATCA AATGCTGGGT
AAAATTGCTT TAGAAGTCCC ACTATGGAAT TAA
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| Protein sequence | MDIPKIQWYP GHIAKAEKKL SEIINKVDLV IEVRDARIPL STGHPHLNKW INNKKHILVI
NRSDMISHNT INSWNNWFNA KDQYPLWCDA KRGIGIKEIC KSAKDSRSSI DDRRLSRGMR
IRPIRALTLG FPNVGKSALI NRIAKKRVVD SARKAGVTRN LRWIKLDSGI DLLDAPGVIP
PNLEDQKSAL NLALCDDIGE AAYEIESVAI EFIKIISTLN KDKNANISVK KISNRYGVDI
TKGFKSPSAW IDEAASKHTS GDKRRMSHKL LEDYRNQMLG KIALEVPLWN
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