| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0195 |
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| Symbol | |
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| ID | 3764980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 187446 |
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| End bp | 188405 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637796702 |
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| Product | putative pseudouridylate synthase specific to ribosomal large subunit |
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| Protein accession | YP_396693 |
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| Protein GI | 78778581 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0799995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAA ATAATCAAAA TTCTTTCGGC ATTGGAGAAG GCGAGCGTAT AGAAATTATT
TATGAGCTAC CTCTTCCTAT GAGGCTAGAC AGATGGTTGG TAAGTAAAAG GCCAGAACAA
AGTAGAGCAA GAATTCAACA TTTTATAAAT TCAGGTTTAG TACTTGTAAA CTATAAGACC
GCGAAAGCAA AGACCCCATT AAAAAATGGC GACAATGTTC AAATATGGAT GCCTCCTCCA
GAACCTCTTA TTTATTTGAA ACCTGAAAAA ATGGATTTAA ATATCCTCTT TGAAGACAAG
CACATTATAG TAATCAATAA ACAATCAGGA CTAATTGTTC ATCCAGCCCC TGGACACAAA
TCTGGAACTT TAGTGAATGG ATTACTTTTT CACTGTAAAG ATCTACCTGG AATTAATGGG
AAACTAAGAC CTGGGATTGT TCACAGATTA GATAAAGATA CCTCCGGATG TATGGTGGTT
GCAAAAAGCC AAGAGGCATT AGTAAATCTC CAGAAACAAA TTAAAGAAAA AATAGCATCA
CGCGAATATA TTGCAGTCAT TCATGGAGCA CCTAATTCTG AAGAAGGCCA AATAGTGGGA
CACATTGGCA GAGATAAATT AAATAGATTG AAATATAAAG TAGTTGAAGA AACTACAGGA
AGGTATGCCT GTACCTATTG GAAATTAGAA GAAAGATTTG GCAATTACTC ATTAATGAGT
TTCAAACTAG ATACGGGGCG AACGCATCAA ATAAGAGTTC ATTGCGCTCA CATTAATCAT
CCAATTGTAG GTGATCCGTT ATATGGAAGA TGTAAAAAAC TACCATGTCA ATTAGATGGC
CAAGCTTTAC ACGCTATAAA GCTTGGACTT ATACATCCAA TAAATGGTAA AGAAATGATA
TTTGAATCAG AATTACCATT AGATTTTCAA AAATTACTAA GAGTTCTTAA AGTTAAATAA
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| Protein sequence | MELNNQNSFG IGEGERIEII YELPLPMRLD RWLVSKRPEQ SRARIQHFIN SGLVLVNYKT
AKAKTPLKNG DNVQIWMPPP EPLIYLKPEK MDLNILFEDK HIIVINKQSG LIVHPAPGHK
SGTLVNGLLF HCKDLPGING KLRPGIVHRL DKDTSGCMVV AKSQEALVNL QKQIKEKIAS
REYIAVIHGA PNSEEGQIVG HIGRDKLNRL KYKVVEETTG RYACTYWKLE ERFGNYSLMS
FKLDTGRTHQ IRVHCAHINH PIVGDPLYGR CKKLPCQLDG QALHAIKLGL IHPINGKEMI
FESELPLDFQ KLLRVLKVK
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