| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0191 |
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| Symbol | trmE |
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| ID | 3764976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 181580 |
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| End bp | 182962 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 637796698 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_396689 |
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| Protein GI | 78778577 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.377202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTCGA TCGTTACTAC AGAAGATACC ATAGCCGCAA TTGCTTCAGC TATAAGTATA
GGGAAAGGAG GAGTTGCGAT AATAAGAGTA TCAGGGAAAG ACTCAATAAA TTCTTGCAAA
AAGATTGTTC AAACTAAATC TAAATATGCA TGGGAATCAC ATAGAGTTTT TCATGGTTTT
ATTCTGGAAA ATAAACAAAA TAAATTTATA GATGAGGTTT TAATTTTAGT AATGAAATCA
CCAAATAGCT TCACAGGAGA GGATGTTGTT GAACTTCATT GCCATGGAGG AATAATCCTA
GTAAATAAAG TTCTACAGAG ATTATTATCT AGTAATTCTA GAGTTAGACT TGCAAACCCA
GGAGAATTTA GTCAAAGAGC TTTTCTTAAT GGGAAAATAG ACCTTACTCA AGCCGAGTCG
ATTAATCAAT TAATTAATGC AAGCAATACC AGATCAGCAG AGCTAGCTTT TAGTGGGGTT
CAAGGGAAAA TAAAGAAAAA AATTAATGAT ATTAAAAATG ACCTTATAAA TCAACTTTGC
GAAATAGAAG CAAGAGTTGA TTTTGAAGAA GACTTCACAG ATTTTGATTA CAACAAATAT
CTAAAAAACA TTAAAAAAGT AAAAGAAAAA ATAGAATTAC TAATAGAAAA TGCAAAAAGA
AATTCATATA TTCACAATGG AATATCCATT GCCCTTATAG GTAAAACGAA TGTTGGTAAA
AGCTCTTTAC TAAATTTGCT TGCAAAAAAA GAGAAGGCAA TCGTAACTAA TATTCCTGGA
ACAACTAGAG ATGTTATTGA AGTTAATTTA ACTATTAATG ATATTCCAAT GAAAATAATT
GATACTGCTG GCATAAGAGA AACTCATGAA CAAATTGAAA GTATTGGAAT TAAAAAAAGT
TTTAGGAAAA TTAAAGAGTC AGATTTTATA ATTTATATTT ATAGTCTTGA AGAAGGATTT
AATAAAGAAG ACAAAAAAAT AATACAAGAA ATCCCCAAAG AAAAATTAAT TACTATTTTG
GGCAATAAAA AAGATTTAAT TGATTGCAAA AATATTAATT CAAATGAGTT AAAAAACACA
ATTCTTATGA GCATTAAGAA TAATGATGGC GAAAGATTAT TAATCGACAC AATCATAAAA
AAATGCGGAT TAAAACAAGT AGAAAATATC AATATATTTT TAAACGAAAG ACATCTAACA
AATTTGTCTT CTTGCCTATC TAATTTAAAT GATACTGATG TAATAATTAA AAATAAATTG
CCATTTGATT TGTTATCAAT AGAACTGAGA GATGGAATTC AAAACTTATC TAAAATAACT
GGTCAAGAAT TAACAGAGGA ACTTCTAGAT AATATTTTTT CTAAGTTTTG TATTGGTAAA
TAA
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| Protein sequence | MDSIVTTEDT IAAIASAISI GKGGVAIIRV SGKDSINSCK KIVQTKSKYA WESHRVFHGF
ILENKQNKFI DEVLILVMKS PNSFTGEDVV ELHCHGGIIL VNKVLQRLLS SNSRVRLANP
GEFSQRAFLN GKIDLTQAES INQLINASNT RSAELAFSGV QGKIKKKIND IKNDLINQLC
EIEARVDFEE DFTDFDYNKY LKNIKKVKEK IELLIENAKR NSYIHNGISI ALIGKTNVGK
SSLLNLLAKK EKAIVTNIPG TTRDVIEVNL TINDIPMKII DTAGIRETHE QIESIGIKKS
FRKIKESDFI IYIYSLEEGF NKEDKKIIQE IPKEKLITIL GNKKDLIDCK NINSNELKNT
ILMSIKNNDG ERLLIDTIIK KCGLKQVENI NIFLNERHLT NLSSCLSNLN DTDVIIKNKL
PFDLLSIELR DGIQNLSKIT GQELTEELLD NIFSKFCIGK
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