| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0187 |
|---|
| Symbol | |
|---|
| ID | 3764972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 176958 |
|---|
| End bp | 177683 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637796694 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_396685 |
|---|
| Protein GI | 78778573 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0306634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCTC AAATTAAAAA CTTTTTATTT TTGATACTAT TTAGCTTTTT TTTACCTACC
TCATTATTGG CAAGGGATTT AGTAATAAAA AGTTTGGGAC ATAGTAGTTT TTTAATTAAT
AGTGCAGATA AATCTATTCT TATAAATCCC TTTAAAGCAA TAGGTTGTGC AAGTAATTTA
AAGGAGCCAA AAGAAGTTAA CGTAGATTTT ATTTTAGCTA GTTCTAGGCT TTCAGATGAA
GGATATAATC CTAATGATCA ATTAATGTTT GTTGAGCCAG GAATCTATAA ATTTGAGGAT
ATTTTATTAA ATGGAATTTC TGTCCCACAT GACAGAGTAG ATGGAAGAAG ATTTGGGATG
GCAACTGTTT GGAGTTGGGA GCAGAATGAA CTTAAAATTG TTCATATGGG AGGAGCTGCT
GGTGATATTG ATATAAATAG TCAAATTATT TTGTCTCATC CAGATATCTT ATTTATTTCA
ATTGGAGGAG GAATAAAATC TTACAATGGG AAAGAAGCCT CAAGAATAGT TAAGATCTTA
AAACCTAATG TAGTCATTCC TGTTCACTTT GAACGTGGCA AACAAATTAA TAAAGAATGT
GACTTCTCAA ATGCTGATTT ATTTATCGAA AATATGAAAG ATTTTCAAGT AAAATATGTT
GGAAAAGATT TTCAAATAAA ACCTAAAAGA ATCGATCAAA ATACAATTTA TATTTTCAGT
AATTAA
|
|---|
| Protein sequence | MISQIKNFLF LILFSFFLPT SLLARDLVIK SLGHSSFLIN SADKSILINP FKAIGCASNL
KEPKEVNVDF ILASSRLSDE GYNPNDQLMF VEPGIYKFED ILLNGISVPH DRVDGRRFGM
ATVWSWEQNE LKIVHMGGAA GDIDINSQII LSHPDILFIS IGGGIKSYNG KEASRIVKIL
KPNVVIPVHF ERGKQINKEC DFSNADLFIE NMKDFQVKYV GKDFQIKPKR IDQNTIYIFS
N
|
|---|
| |