Gene PMT9312_0182 details

Gene Information

• Locus tag: PMT9312_0182
• Symbol: prfB
• ID: 3764967
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: +
• Start bp: 174115
• End bp: 175179
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637796689
• Product: peptide chain release factor 2
• Protein accession: YP_396680
• Protein GI: 78778568
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1186] Protein chain release factor B
• TIGRFAM ID: [TIGR00020] peptide chain release factor 2

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAGGA TTGTCTTTGA CGTACCAAGA TTAAAAGCAA AAAGGAGAGA GTTAGAGCAA 
ATTTCTGCTC AGCCTGAATT TTGGGAGAAT CAAGAAGCAG CTAAAAAGCA AATGTTAATC 
CTTGATGATG TCAAAGCCCA ACTCGAATTG TTAGATAAAT GGAAAACTTT TATTTCTGAT 
GCTAATGCCT CTCTTGAGCT TTATTCTTTA GAACCTGAAG AGGAAATGAT TTTGGAGTCC 
CAGCAGGGCT TAAAGAAATT AAGAGATAAT TTAGATAAAT GGGAATTCGA AAGATTGTTA 
TGTGGTGAAT ACGATAAGGA AGGAGCAGTA GTTTCTATTA AAGCAGGTGC CGGTGGAACA 
GATGCGCAGG ATTGGGTAGA GATATTATTG AGAATGTATT CAAGATGGGC CGATAATAAT 
CAAATGAGCC TTATAATCAA TGAATTATCT CAAGGAGAAG AAGCAGGTAT TAAAAGTGTA 
ACGTTTGAAA TTGATGGAAA ATATGCATAC GGCTATCTGC AATATGAAAA AGGAACTCAT 
AGATTAGTAA GAATTTCTCC TTTTAATGCT AATGGCAAAA GGCAAACCAG CTTTGCTGGG 
GTAGAGGTTA TGCCAAAATT AGATGATAAT ATTTCGCTTG ATATACCTGA AAAAGATTTA 
GAAATTACAA CGAGTAGATC CGGTGGAGCG GGAGGACAAA ATGTTAATAA AGTAGAAACA 
GCAGTAAGAA TTGTTCATTT GCCTTCCGGG ATTTCAGTAA GATGCACCCA AGAAAGATCT 
CAATTACAAA ATAAAGAAAA AGCTATGTTA CTTCTAAAGT CTAAACTATT AGTGATTGCT 
AAAGAACAAC GAGCTGCTGA AATCGCTGAT ATTAAAGGTG ATATTGTAGA AGCTGCATGG 
GGCAATCAAA TAAGAAATTA TGTTTTCCAT CCCTATCAAA TGGTAAAAGA TCTTAGGACT 
ATGCAGGAGA CTAACGAGTT AGATAGTGTT TTAGATGGTG GACTTGAACC ATTTATTCAT 
GAATTATTAC GTATGAATAT TTCTTCGAAC GAATCTATTG AATAA 

 

Protein sequence

MLRIVFDVPR LKAKRRELEQ ISAQPEFWEN QEAAKKQMLI LDDVKAQLEL LDKWKTFISD 
ANASLELYSL EPEEEMILES QQGLKKLRDN LDKWEFERLL CGEYDKEGAV VSIKAGAGGT 
DAQDWVEILL RMYSRWADNN QMSLIINELS QGEEAGIKSV TFEIDGKYAY GYLQYEKGTH 
RLVRISPFNA NGKRQTSFAG VEVMPKLDDN ISLDIPEKDL EITTSRSGGA GGQNVNKVET 
AVRIVHLPSG ISVRCTQERS QLQNKEKAML LLKSKLLVIA KEQRAAEIAD IKGDIVEAAW 
GNQIRNYVFH PYQMVKDLRT MQETNELDSV LDGGLEPFIH ELLRMNISSN ESIE