Gene PMT9312_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0178 
Symbol 
ID3764963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp170373 
End bp171290 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content28% 
IMG OID637796685 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_396676 
Protein GI78778564 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR02235] 1,4-dihydroxy-2-naphthoate phytyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAA ATAAAAAAAA ATTATGGAAA CAAGCAATAA AATGGCCTCT TTATTCTGTT 
GCAATACTTC CAGTTTTTAT TACAGGGGCT TATCTACTAA ATCAATATGA AACAGTAAAA 
ATATATAATT TGCTTGCATT TACGTTAGCT GCAATTTTGA TATTACTTTG GGAAAATCTA 
ACTAATGATT TATTCGATGC AGAAACAGGA ATCGATGAAT TTAAATTCCA TTCAATTGTA 
AATCTTATAA AAAATAAAAA ATTAATTTCA TTTATTGCCT ATACATCTTT AGTTATTGGT 
TTATTAATAA TTTCAATTAT TTCAGTATCA ACAAGCGTAA ACATTTTGAT TTTAGTAGCA 
GCTTGCTGCT TCTTAGGATA TTTATATCAA GGACCTCCTT TTAGATTTGG CTATCAAGGG 
TTAGGAGAAC CATTATGCTG GCTTGCATTT GGACCTTTTG CTTACTCTGC AGTCTTAATA 
GCGTTAAATC CATCTAATAT TTATTTCGAA GATATTCCTT GGAAAGTTTC TTTATTACTT 
GGTTCAGGAC CTTCCTTAGC AACAACTCTA GTATTATTTT GTTCTCATTT TCATCAAATT 
ATTGAAGATG AAAAGCATGG CAAACATTCA CCTTTAGTTC GCCTGGGAGC AAAAAAAGGT 
TCTCAATTTG TGCCTTGGAT AATCTTTACT ATATATATTT TTCAACTTTT CACCATACTT 
ACTGGATTTA TTCCAATTTT TTGTATCCTA TATTTGATTA GTTTTCCTCA AGCAATAAGG 
CTTATAAATT TATTACACTC TTCGTATAAC AAACCTTTAG CAATAAAAAA TTGTAAATTC 
ATTGCAATAA AATTCCAAAC TCTTAATGGA ATTGGCTTAA TAACAGGATT AATTTTTAAT 
TACTTGATTA ATAAATGA
 
Protein sequence
MDENKKKLWK QAIKWPLYSV AILPVFITGA YLLNQYETVK IYNLLAFTLA AILILLWENL 
TNDLFDAETG IDEFKFHSIV NLIKNKKLIS FIAYTSLVIG LLIISIISVS TSVNILILVA 
ACCFLGYLYQ GPPFRFGYQG LGEPLCWLAF GPFAYSAVLI ALNPSNIYFE DIPWKVSLLL 
GSGPSLATTL VLFCSHFHQI IEDEKHGKHS PLVRLGAKKG SQFVPWIIFT IYIFQLFTIL 
TGFIPIFCIL YLISFPQAIR LINLLHSSYN KPLAIKNCKF IAIKFQTLNG IGLITGLIFN 
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