| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0166 |
|---|
| Symbol | |
|---|
| ID | 3764951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 160050 |
|---|
| End bp | 161294 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637796673 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_396664 |
|---|
| Protein GI | 78778552 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0594261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTAAGTA CATTTTCTCG CCAAGATCAA AATTATAAAA ATGACGATTT AAATCAACCC
TCCAAAGAGG GAAGATTTGG AAAATATGGT GGTCAATATG TTCCTGAAAC ACTAATGCCT
GCTCTTTTTG AGCTTGAAAC AGCTGCATCA AATGCATGGA AAGATAAACT TTTTGTAAAA
GAATTAAATC ATCTACTTAA GACTTATGTA GGAAGAGAAA CACCACTTTA TGAAGCCAAA
AGACTTACTG AACATTACAA AACTAAACAT GCAACTACAA GAATATGGCT AAAAAGAGAA
GATTTAAATC ATACAGGTGC TCACAAAATT AATAATGCCC TTGGACAAGC TTTATTAGCA
ATAAGAATGG GTAAAAAAAG GATAATCGCA GAAACTGGAG CAGGTCAGCA TGGAGTTGCT
ACGGCTACTG TTTGTGCCAG ATTTGGCATG AAATGTATTA TCTATATGGG TGCTGAGGAC
ATAAAAAGAC AATCCCTCAA CGTCTTTAGA ATGAAACTGC TAGGAGCCGA AGTTAAAGTT
GTCAATTCTG GAACTGCAAC ACTTAAAGAT GCCACTAGTG AAGCTATTAG GGATTGGGTT
TCTAATGTCG AAACCACACA TTACATTTTA GGATCTGTTG CGGGCCCGCA CCCTTTCCCA
AAAATTGTAC GAGATTTTCA TGCAGTTATA GGAGAAGAAA CTAAAAAACA ATGTCAGGAA
TCGTTTGGAT CTTTACCAGA TATTTTACTT GCTTGTGTAG GTGGGGGATC AAATGCAATG
GGCCTTTTCC ATCCTTTCAT TAAAGAAACA TCTGTACGAC TAATTGGAGT TGAAGCCGCA
GGAAGCGGAG TTGATACTGA CAAACATGCT GCAACTATTA CTAAAGGGTC AGTTGGAATT
TTGCATGGAT CAATGAGTCT TCTTTTACAA GATGATAATG GTCAAGTACA AGAAGCCCAC
TCAATAAGTG CAGGGTTAGA TTACCCTGGA GTAGGACCTG AACATAGCCA TTTAAAAGAT
ATAGGCAGAG CAGAATATGG GTCAGTCACA GATCAAGAAG CTTTAGATGC TTTGAGACTT
GTTAGTGAAC TTGAAGGAAT TATACCAGCG CTTGAAACGT CCCATGCCTT TGCTTGGTTA
GATAAATTAT GCCCTACTCT GGAAAAAGAT ACTCATATAG TTATCAATTG CTCTGGTAGA
GGTGACAAAG ATGTTAATAC TGTTGCATCT TCATTAGATA TTTAA
|
|---|
| Protein sequence | MVSTFSRQDQ NYKNDDLNQP SKEGRFGKYG GQYVPETLMP ALFELETAAS NAWKDKLFVK
ELNHLLKTYV GRETPLYEAK RLTEHYKTKH ATTRIWLKRE DLNHTGAHKI NNALGQALLA
IRMGKKRIIA ETGAGQHGVA TATVCARFGM KCIIYMGAED IKRQSLNVFR MKLLGAEVKV
VNSGTATLKD ATSEAIRDWV SNVETTHYIL GSVAGPHPFP KIVRDFHAVI GEETKKQCQE
SFGSLPDILL ACVGGGSNAM GLFHPFIKET SVRLIGVEAA GSGVDTDKHA ATITKGSVGI
LHGSMSLLLQ DDNGQVQEAH SISAGLDYPG VGPEHSHLKD IGRAEYGSVT DQEALDALRL
VSELEGIIPA LETSHAFAWL DKLCPTLEKD THIVINCSGR GDKDVNTVAS SLDI
|
|---|
| |