Gene PMT9312_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0162 
Symbol 
ID3764947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp155685 
End bp156803 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content36% 
IMG OID637796669 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_396660 
Protein GI78778548 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAATACG GATTAGATCT TGAATATAGT TTTAATGAAT TCTTCAAAGG TTTTGGCCTT 
TCTAGTGAAA TCGCTCATAT AATTTGGCTC CCTATACCTA TGCTTTTGGT TTTAGTAGCG
GCAGTTGTTG GAGTTTTAGT AACAGTTTGG CTTGAAAGAA AAATATCTGC TGCTGCTCAA
CAAAGAATAG GTCCCGAATA TGCAGGAGCA TTAGGCGTAC TCCAACCAAT TGCGGATGGT
CTTAAATTAC TTGTCAAAGA GGATATAATC CCTGCTAAAG CAGATGGAAT TCTCTTCACC
GCTGGACCTA TATTAGTTCT TGTTCCAGTT ATTCTTTCTT GGCTAATTGT ACCTTTTGGA
CAAAACCTGT TAATAAGTAA CGTTGGCATT GGAATTTTCC TATGGATTGC TTTAAGCAGT
ATCCAACCAA TTGGACTCCT TATGAGCGGT TACGCATCAA ATAATAAATA TTCATTATTA
GGCGGATTAA GAGCTGCTGC TCAATCTATA AGTTACGAAA TACCTTTAGC TTTATCTGTA
CTAGCTATCG TACTAATGAC AAATTCTCTA AGTACTATTG ACATTGTTAA CCAACAAAGT
GGTGCTGGAA TCCTAAGTTG GAATATTTGG AGACAACCCG TTGGTTTTAT AGTCTTTTGG
ATTTGTGCTC TTGCAGAATG CGAAAGACTT CCATTTGACT TACCTGAAGC TGAAGAAGAA
TTAGTTGCAG GATATCAAAC TGAATATGCA GGTATGAAAT TCGCTTTGTT CTACCTTGGT
AGTTACATTA ATCTAATACT TTCAGCATTA TTGGTATCAA TACTTTATTT AGGAGGATGG
GGTTTTCCTA TCCCAGTTGA ATTAATAGCT AAATTTCTTC ATTTGCCCAT TAATGCACCC
GTCATACAAG TTTTCACTGC ATCAATAGGA ATTGTAATGA CTGTATTGAA AGCGTATCTT
TTAGTTTTCA TCGCAATATT ATTACGTTGG ACAACTCCTA GAGTAAGAAT AGATCAACTT
TTAGATCTAG GATGGAAGTT TCTTCTTCCA ATTTCTCTTG CTAATCTTTT GATAACTGCA
GGATTAAAAC TTGCTTTTCC TCAATTCTTT GGTGGTTAA
 
Protein sequence
MEYGLDLEYS FNEFFKGFGL SSEIAHIIWL PIPMLLVLVA AVVGVLVTVW LERKISAAAQ 
QRIGPEYAGA LGVLQPIADG LKLLVKEDII PAKADGILFT AGPILVLVPV ILSWLIVPFG
QNLLISNVGI GIFLWIALSS IQPIGLLMSG YASNNKYSLL GGLRAAAQSI SYEIPLALSV
LAIVLMTNSL STIDIVNQQS GAGILSWNIW RQPVGFIVFW ICALAECERL PFDLPEAEEE
LVAGYQTEYA GMKFALFYLG SYINLILSAL LVSILYLGGW GFPIPVELIA KFLHLPINAP
VIQVFTASIG IVMTVLKAYL LVFIAILLRW TTPRVRIDQL LDLGWKFLLP ISLANLLITA
GLKLAFPQFF GG