Gene PMT9312_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0161 
Symbol 
ID3764946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp154990 
End bp155616 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content33% 
IMG OID637796668 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_396659 
Protein GI78778547 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR00403] NADH-plastoquinone oxidoreductase subunit I protein
[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.646634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT TCCTTCAACA AATAAATAGC TATATCAAAG AAGCATTTAA TGCTGGCAAA 
TATTTATACA ATGGCTTATC AGTAACTTTT GATCATCTTC GGAGAAGACC TGTTACAGTC
CAATATCCAT ATGAAAAACT AATACCCTCT GAAAGATATA GAGGAAGGAT TCATTATGAA
TTTGATAAAT GTATAGCTTG TGAAGTTTGT GTGAGAGTAT GTCCAATAAA TCTACCAGTA
GTTGATTGGG TAATGAATAA AGAAACCAAA AAAAAGGAAC TTAGAAATTA TTCAATAGAT
TTTGGAGTAT GTATATTTTG TGGAAATTGT GTTGAATATT GTCCAACTAA TTGCTTATCA
ATGACAGAAG AATACGAATT AGCTACTTTT GACAGACATA ATCTAAACTT TGATAACGTC
GCACTTGGGA GGCTCCCTAC TAACGTCACA ACAGATCCGT CAATCAAACC ACTAAGAGAA
CTTGCCTATC TTCCCAAAGG CGTAATGGAT CCTCATGAGA TACCAGCTTC CGATATCAGA
GTTGGTAAAT TACCTGAAGA AGTTTATGAT TGGATGAGAC CAACCTCCAA TGAAAATAAA
GATAAAATTT CTAATTCAAA TAATTAA
 
Protein sequence
MKNFLQQINS YIKEAFNAGK YLYNGLSVTF DHLRRRPVTV QYPYEKLIPS ERYRGRIHYE 
FDKCIACEVC VRVCPINLPV VDWVMNKETK KKELRNYSID FGVCIFCGNC VEYCPTNCLS
MTEEYELATF DRHNLNFDNV ALGRLPTNVT TDPSIKPLRE LAYLPKGVMD PHEIPASDIR
VGKLPEEVYD WMRPTSNENK DKISNSNN