Gene PMT9312_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0160 
Symbol 
ID3764945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp154378 
End bp154977 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content33% 
IMG OID637796667 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_396658 
Protein GI78778546 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0631187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTG CAGTAACAAC TCAAATAATT TGTTTTATAG TTCTATCTTT AGTTGTTCTT 
ATTGGAGCGC TAGGAGTTGT ATTGCTCGAA AGTATTGTTT ATTCAGCCTT TCTGCTTGGA
GGAGTTTTCA TGAGTGTTGC AGGATTATAT CTACTTCTAA ATGCAAGTTT TGTTGCTGCA
GCGCAAGTTT TAGTTTATGT GGGTGCAGTG AATGTACTAA TAATTTTTGC GATAATGTTA
GTTAATAAAA AAGAAGATTT AAAGCCCATC AATAACATTA AATCAAGAAG AATCATATCA
ACATCTATTT GTTTAACCCT ACTCAGCCTT TTAATAAGAG TTGACTTGAC AAATGTATGG
AGATTAGCAA GCCCCGAAAA CTCTATAGGT GAAGAGTCCA CTATTAGAAT AGGGGAGCAT
CTTTTTAGTG ATTATTTACT TCCATTTGAA TTAGCTTCAG TTTTACTTCT AATGGCAATG
ATTGGAGCCA TTGTTTTAGC GAGAAGGGAT GTTATGAACA AAGATATTTC AACTGGATTA
CCTGTTGATC AAGAGTTAAT TGAAAAATCA TCAGAACCAT TACTTACTAA TAAAAATTAA
 
Protein sequence
MTIAVTTQII CFIVLSLVVL IGALGVVLLE SIVYSAFLLG GVFMSVAGLY LLLNASFVAA 
AQVLVYVGAV NVLIIFAIML VNKKEDLKPI NNIKSRRIIS TSICLTLLSL LIRVDLTNVW
RLASPENSIG EESTIRIGEH LFSDYLLPFE LASVLLLMAM IGAIVLARRD VMNKDISTGL
PVDQELIEKS SEPLLTNKN