Gene PMT9312_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0144 
Symbol 
ID3764929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp139636 
End bp140055 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content31% 
IMG OID637796651 
ProductRNA-binding region RNP-1 (RNA recognition motif) 
Protein accessionYP_396642 
Protein GI78778530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTC GAATTTACAT TGGCAATTTA CCACAAGGAT TTAATCAAAA AGAATTTGAT 
AACCTTTTAA AATCAGTTTC TGATTCGATT AGATTTAAAG CAGTTTTAGA TAAGGAAACC
AAGGAATGCA GGGGATTTGG TTTTGCGACA GCAAGTAATG AAGAAAATGC TGATTTAATA
ATTCAGAAAT TAAACGGTTT TGAATTTAAT GGTTCCAAAT TAAGAGTAGA GTTATCAGAA
AAAAAAGATT CTCTTTCAAA AAAAAGAAAT AGTGGAAATT TTAACAAGAA TAAGAAGAAG
AAAGATTTTA AGAAAATTGT TCATAGTGAC GCCCCTAACC TTGAAGCACC TGATCCAAGA
TGGGCTGGAG AACTGTCTAA ATTAAAAGAT TTATTAGCTA ATCAGAAGAC ACCTGCTTAG
 
Protein sequence
MSIRIYIGNL PQGFNQKEFD NLLKSVSDSI RFKAVLDKET KECRGFGFAT ASNEENADLI 
IQKLNGFEFN GSKLRVELSE KKDSLSKKRN SGNFNKNKKK KDFKKIVHSD APNLEAPDPR
WAGELSKLKD LLANQKTPA