Gene PMT9312_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0143 
Symbol 
ID3764928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp138356 
End bp139576 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content27% 
IMG OID637796650 
Productpoly A polymerase family protein 
Protein accessionYP_396641 
Protein GI78778529 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGTA ATAACGTTCT TACTGATCAT ACACTAATCA TTGATGAATT AGAAAGAAGT 
ATAAAATTTT ATAATTGGCA TTTTATCTTA TCTTTTCTAC CTAAAGGATC ATTTTTAGTT
GGTGGTTACA TAAGGGATAT TATTTTGGGA AGATTAACTG AAGATGTAGA TGTTGATATT
GTGGTACCCC TAAATGCTAT TGAAATTGGG AAAAAAATTT CAGACAATTT CGAGTCTAAA
TTTATAATTT TAGATAAGAA AAGAGAAGTG GTAAGGGTTA TTCTTGATCA TATTTCAATT
GATATTGCTA ATCAGATTTC CTCCACGATC GAAGGAGATT TGAGTAGTAG GGACTTCTCG
ATTAATTCAA TTGCTTTTTT ATTTGATAAT AAATGTTTGT TTGATCCATT TAATGGTCTA
AAAGATCTAG AATCTTCCTT GCTGAGAACT CATTCAGAAA AAAATTTAAT GAATGATCCT
TTACGAATAT TAAGATGTTT TCGATTTGTT TCTGAATTTA ATTTTAAAAT TGATCAAGAT
TTAATAACTT ATATAAAAAA AAATAAAGGG AAATTATATT TTGTTGCCAA AGAAAGGATT
AATTATGAAA TTCAGAAGAT AGTAACTGGG GCAAATGCTT TAGAGGCGAT AATTTTAGTA
AAAAATTTTA ATATTTTTGG ATCGGATAAT TTATACAAAG ATTCATTTTT TTTGGATTTA
CAGAATATTA ATTATGAAGA ACTTAATCAG TATGAAAAGA AGAATTTTTT ACCATTTTTT
TTTATTACCC AAATTTTAGA TGAAGTATCT TTAAGTAAAT ATAAATTTAG TAGAGCTGAA
ATTGTAAGAA CAAAGTTATT GCGAAAATGG CACGTTTTTT TAAAGAAAAA AAATATCACT
CAGTTAAATG AATTAGATAG ATTTGCATTA CATCAAGAAT TAGAAATGTT TCTTCCATCT
TTTATTTTTT ATTTACCTCA AAAATTACGT TTCGATTGGC TCAATAGGTG GCGGGACAAG
GATGATAGAT TATTTCATCC TTCAAATTTA ATTAATGGTG ATGTAATCAA AAAAAATTTA
AAAATAAAGG ATGGCCCTCT GTTAGGCAAG CTTTTACAAT ATCTTTCAAA GGAGCTTGCA
TATAAAAGAT TGAATAATTT TGATGAAGCT ATTTATAAAG CAAAGCAATG GATTGAACAA
AATGCGCCAA AATGTGATTA A
 
Protein sequence
MKGNNVLTDH TLIIDELERS IKFYNWHFIL SFLPKGSFLV GGYIRDIILG RLTEDVDVDI 
VVPLNAIEIG KKISDNFESK FIILDKKREV VRVILDHISI DIANQISSTI EGDLSSRDFS
INSIAFLFDN KCLFDPFNGL KDLESSLLRT HSEKNLMNDP LRILRCFRFV SEFNFKIDQD
LITYIKKNKG KLYFVAKERI NYEIQKIVTG ANALEAIILV KNFNIFGSDN LYKDSFFLDL
QNINYEELNQ YEKKNFLPFF FITQILDEVS LSKYKFSRAE IVRTKLLRKW HVFLKKKNIT
QLNELDRFAL HQELEMFLPS FIFYLPQKLR FDWLNRWRDK DDRLFHPSNL INGDVIKKNL
KIKDGPLLGK LLQYLSKELA YKRLNNFDEA IYKAKQWIEQ NAPKCD