| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0135 |
|---|
| Symbol | |
|---|
| ID | 3764920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 131196 |
|---|
| End bp | 132545 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637796642 |
|---|
| Product | DNA repair protein RadA |
|---|
| Protein accession | YP_396633 |
|---|
| Protein GI | 78778521 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAGCA AATTGTCAAC TTTTATTTGT CAAAATTGCG GAACTGAAAC TTCTCAATAC
TTTGGGAAAT GCCTTAATTG CAACTCATGG AATTCCATTG TTGAAGAAAT TAAAAGCAAG
AGATCTAAGC ATCAAGGTGT AAATAATAGT CAAAAAGCTA TACCATTTAA TGAAATTTCA
TCTAAAAAAA TATCAAGATT TACAAGTGGT TTTAATGAGT TTGATCGAGT TCTTGGAGGC
GGGATAGTCC CTGGATCTGT TGTGTTACTT GGAGGAGAGC CAGGGATAGG TAAAAGCACA
ATAGTTCTTC AATCAGCAGG AAAAATATCT CTCAACGAGA AAGTTTTATA CGTAACTGCC
GAGGAATCTT TAGAACAAGT AAAAATCAGA TGGGAAAGAT TAAATCAAAA TAGTATAGAT
TTAAAAATTT TTGCAGAAAC CAATTTATCT CTAATAATTA AAGAGATAAA ACGTGTAAAT
CCAAGTTTCG CAATTATCGA TAGTATTCAA GCCATCCATA ATCATGAGAT GGAAAGTTCG
CCAGGATCAG TTTCTCAAGT TAGAGAATGT TCATCTGAAT TACAGAATCT CGCTAAACAA
AATAATATTG CACTTCTAAT AATTGGTCAT GTCACCAAAG ATGGGACTTT AGCTGGTCCA
AAAACTCTAG AGCATTTAGT TGATGCAGTA ATAAACTTTG AAGGAGATAA TATTTCCTCT
CATAGATTAC TAAGAAGTAT AAAAAATCGA TTTGGATCTA CCTTTGAAAT TGGAATTTTT
GAAATGCTTG AAAAAGGCTT ACGGGAGGTA AAAAACCCAA GTTCAATCTT TACAAATAAA
GAGAATATTG CAGGTGTGAC AACCACGATT ACAAAAGAAG GTACTAGACC ATTTGCAGTT
GATATACAAG CACTGGTAAA TAAAACTTTC TACAGTAACC CAAGACGAAC CACAACTGGA
ATTAGCATTA ACAGATTACA TCAAATTCTA GCTGTTATTG AAAAACACGT CGGCATTAAA
TTATCTGAAT TTGATTGTTA TGTAGCTACT GGGGGTGGTT TTGAAATTAA TGATCCTTCA
TCTGACTTAG GTGTAGCCAT ATCAATTTTA TCAAGTTTAA AAAATATTCC TCCTTTGGCC
AATAGCTCAT TTATTGGAGA ATTGGGTTTG AGCGGTCAAG TTAGAAAATC GAATAACCTT
CGAACAAAGA TAGAAGAGGC TGCAAGACTA GGAATCAAAA ATATCGTAGT GCCAAAATTA
GAGGAGGATC TAAATAATTT TCAAAATTTA ATCAATATCA AAGAGATTTC GAATATTAAA
GAAGCAGTTG AATATTCTTT ATCAGAGTAA
|
|---|
| Protein sequence | MSSKLSTFIC QNCGTETSQY FGKCLNCNSW NSIVEEIKSK RSKHQGVNNS QKAIPFNEIS
SKKISRFTSG FNEFDRVLGG GIVPGSVVLL GGEPGIGKST IVLQSAGKIS LNEKVLYVTA
EESLEQVKIR WERLNQNSID LKIFAETNLS LIIKEIKRVN PSFAIIDSIQ AIHNHEMESS
PGSVSQVREC SSELQNLAKQ NNIALLIIGH VTKDGTLAGP KTLEHLVDAV INFEGDNISS
HRLLRSIKNR FGSTFEIGIF EMLEKGLREV KNPSSIFTNK ENIAGVTTTI TKEGTRPFAV
DIQALVNKTF YSNPRRTTTG ISINRLHQIL AVIEKHVGIK LSEFDCYVAT GGGFEINDPS
SDLGVAISIL SSLKNIPPLA NSSFIGELGL SGQVRKSNNL RTKIEEAARL GIKNIVVPKL
EEDLNNFQNL INIKEISNIK EAVEYSLSE
|
|---|
| |