| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0133 |
|---|
| Symbol | |
|---|
| ID | 3764918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 128253 |
|---|
| End bp | 130559 |
|---|
| Gene Length | 2307 bp |
|---|
| Protein Length | 768 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637796640 |
|---|
| Product | putative P-type ATPase transporter for copper |
|---|
| Protein accession | YP_396631 |
|---|
| Protein GI | 78778519 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.57861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAAGAA AGGAGAGCAT TCAATTAAGC ATTACAGGAA TGAAGTGCGG TGGTTGCGTT
AGTACTGTTG AAACAATATT AAATAATTCT GATGGTATTG AAAATGTTTC TGTTAACTTA
CTCACTGAAA GTGCATATTT TGAAATTAGC TATAAACATA TAGAAATAGA AACAGTTCTC
GAAAAACTTA AAGAGAATGG TTTCCCATCA AAGATTTACA TAAATGATTT TTCAAAAAAA
ATAAATAAAG AAGAATTATC AAAAAAAAAG AAATGGAATA ATCAATGGCA AAAGCTAACT
TTTGCTCTAT TACTTTTACT ATTTTCAGGT TTAGGTCATC TGGCAGAAGG AAAATATATA
AATTTTCCAA TATTAGGTAA TATATTTTTT CATGCCTCAT TAGCAACAAT AGCTTTATTA
TTTCCAGGAA GAAGAATAAT TATTAATGGA TTTAAATCAT TTATAAAGAA TCGTCCGGAT
ATGGATTCTT TAGTAGCTCT TGGAGTAACT AGCGCTTATA TAACAAGTCT TCTATCCTTA
ATATTCCCTG CTAGTGGTTT TCCTTGTTTT TTTAATGAAC CAGTTATGCT TTTAGGTTTT
ATATTGATTG GGCGTTTCTT AGAAGAAAGA GCTAGATATC AAACTGGTTC ATCAATTGGA
GAGTTATTAG ATCTTCAACC TGAAATGGCA AATATCTACA CAAAAGATAA TCAAATAAAG
TCAATAAGAG TCAATGCTTT AAAGCCTGAT CAAGAGATTC AAATTTTAGC AGGTGACAGA
GTCCCTGCTG ACTGCATTGT TACTCAGGGT AATTCATATG TTGATGTTTC ACATATTACT
GGAGAATCCA AACCTATCGA AGTAAAAGAA GGTGAAAAGT TATCCAGTGG GTCTTTAAAT
CTTAATTCAA CTCTTAGACT AAAAGTACAG AAGGTCGGCG GGGATTCTTC TCTTGCACAA
CTAGTAAGTC TTATTGAGTC TGTAAACGCT AATAAACCTC CAATTCAAAG AATTGCTGAC
AAAATTGCAG GAAAATTTAC TTACTTTGTA CTTATATTTG CCACTTTAAG TTTCTTTTTT
TGGTGGAAGG GGGCAAAACA CATTTGGCCT GATTTATTAA GTCACAATCA TCATCAATTA
TTAACAAATT CAAGCCACAC ACTTCATAGT TCTCTTGGTA GTAATGCTGA GAATTTCCTG
AGTTTAGCAA TTCAATTGTC AATTGCTGTT TTAGTAATAG CTTGTCCTTG TGCATTAGGT
TTAGCCACAC CAACAGTAAT CACTGTCGCA TCAGGTAAAG CCGCAAAAAA AGGGGTTTTA
TTCAAAGGAG GTGACAAAAT AGAGATGGCT TCAAAAATTA ATCATATTAT TTTTGATAAG
ACTGGTACAT TAACAAAAGG TAAGCTTTTC ATCGTTGATT ATAAAAATAA TAACGATCAT
ACATACTTAT TAAGAATTGC TGCCAGTTTA GAAAAGGAAA GCAGACATCC AATCGCAAAT
GCCTTAATTC AAGAGGCCCA AAAACAAAAT TTAAGTTTAT TTCCAATAAA AAAAATATTA
ACTCATTCAG GGAGAGGTAT ATCTGGAGAA CTTGAGTCAG TTGAAGGACT GATCAATATT
GGAAATATTG AATGGCTACT AAGCAAAGGG ATAGTTATTG ATAATAATGC AAAAAAAGTC
ATTGAAAATG AAGAAACACA AACGCATACA ATTATTGGAG TCAGTATAAA AGATAAGTTA
CTAGGATTTA TCTTATTAGG AGATTTACTC AGAGAGGATT CAATAAAAAC AGTTCAAAAT
TTGAGACAAA ACAAATTTAA AATTAATATT TTAAGTGGAG ATAGAAAACA AACAGTTTTA
GCTTTAGCAA AAAAAATTGG TTTTAAAGAA ACGGAAGTAA AATGGAACCT TCTTCCTCAT
ATGAAACTTA AAACTATAGA AAATTTAAAA ATCGATAATA AAGTGGCTAT GGTTGGTGAT
GGAATTAATG ATGTCCCAGC CTTAGCATCC TCTGACTTAG GAATTGCAGT AGGATCAGGA
ACTCAAATAG CGAAGGCAAA TGCAGATATA GTATTAATGG GAGATCAACT TAATGGATTA
CCATACTCAT TAAATCTTGC AAAAAAAACT ATGAGAAAAA TAAAGCAGAA TCTAATATGG
GCTTTTGGTT ACAACTTACT AGCGATCCCA ATAGCCGCAG GTATTTTGTT TCCTAAATAT
GACATTCTTC TTACTCCCTC AATAGCAGCA TTATTAATGG CTACAAGCTC TATTACAGTT
GTCATTAATG CTTTATCTTT GGATTAA
|
|---|
| Protein sequence | MIRKESIQLS ITGMKCGGCV STVETILNNS DGIENVSVNL LTESAYFEIS YKHIEIETVL
EKLKENGFPS KIYINDFSKK INKEELSKKK KWNNQWQKLT FALLLLLFSG LGHLAEGKYI
NFPILGNIFF HASLATIALL FPGRRIIING FKSFIKNRPD MDSLVALGVT SAYITSLLSL
IFPASGFPCF FNEPVMLLGF ILIGRFLEER ARYQTGSSIG ELLDLQPEMA NIYTKDNQIK
SIRVNALKPD QEIQILAGDR VPADCIVTQG NSYVDVSHIT GESKPIEVKE GEKLSSGSLN
LNSTLRLKVQ KVGGDSSLAQ LVSLIESVNA NKPPIQRIAD KIAGKFTYFV LIFATLSFFF
WWKGAKHIWP DLLSHNHHQL LTNSSHTLHS SLGSNAENFL SLAIQLSIAV LVIACPCALG
LATPTVITVA SGKAAKKGVL FKGGDKIEMA SKINHIIFDK TGTLTKGKLF IVDYKNNNDH
TYLLRIAASL EKESRHPIAN ALIQEAQKQN LSLFPIKKIL THSGRGISGE LESVEGLINI
GNIEWLLSKG IVIDNNAKKV IENEETQTHT IIGVSIKDKL LGFILLGDLL REDSIKTVQN
LRQNKFKINI LSGDRKQTVL ALAKKIGFKE TEVKWNLLPH MKLKTIENLK IDNKVAMVGD
GINDVPALAS SDLGIAVGSG TQIAKANADI VLMGDQLNGL PYSLNLAKKT MRKIKQNLIW
AFGYNLLAIP IAAGILFPKY DILLTPSIAA LLMATSSITV VINALSLD
|
|---|
| |