Gene PMT9312_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0125 
Symbol 
ID3764909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp121632 
End bp122309 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content29% 
IMG OID637796631 
Productputative heat shock protein DnaJ 
Protein accessionYP_396623 
Protein GI78778511 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA ATTTATATGA AGAATTAGGC CTCAAAAAAA ATGCACCCAA AAGTGAAATT 
AAATCTTCAT ATCGTTCTTT AGTTAAGCAA CATCATCCTG ATGCAGGCGG AGACAAAGAA
CGATTTCTTG CAATACAAAA TGCCTGGGAG GTTCTAAATG ATCCTGTAAA AAAAGAACAA
TATGATAGAA GTTTATTCTC TTCCAGTTCA TCCTTTGATT CATTAAATGA AAATTGGGAA
GAGAAATTTA ATTCAAAAAA ATATAATTCG TCAATTAAAG ACAGAGAAGT TAAAACATGG
CTTAAAGAAA TTTACACTCC GATCAATAGA TCAATTAGCC AAATAATTAA ACCTTTGAAA
AACGAAATCA AAGAACTTTC TGCGGATCCA TATGATGACC AACTAATGGA AAATTTTTGC
AGTTATATAA GTCTTTCACA AAAGAAAATA GAAAAAGTTG AAAAAATTTA TAACAAAAAA
ATAGTTCCCA AGTCTATTAC AGCTTTAGGC CTAGATCTTT ATCATTGTTT TTCACAAGTT
AAAGATGCAC TATCAGAATT TGATAGATAT ACACAAGGAT ACGTAGATGA TTACTTATTT
GATGGTAAAG AAATGATTAA AGAAGCAAAA AGAATTCAAT CAAAGATGTC TGCAGAGAAA
AAAAATAAAA ACTTTTAG
 
Protein sequence
MEKNLYEELG LKKNAPKSEI KSSYRSLVKQ HHPDAGGDKE RFLAIQNAWE VLNDPVKKEQ 
YDRSLFSSSS SFDSLNENWE EKFNSKKYNS SIKDREVKTW LKEIYTPINR SISQIIKPLK
NEIKELSADP YDDQLMENFC SYISLSQKKI EKVEKIYNKK IVPKSITALG LDLYHCFSQV
KDALSEFDRY TQGYVDDYLF DGKEMIKEAK RIQSKMSAEK KNKNF